Factsheet for TraesCS3A01G441200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G433900.1	Wheat	nucleus	98.7	98.7
TraesCS3B01G475200.1	Wheat	nucleus	93.62	98.33
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	96.23	86.68
Os01t0927000-01	Rice	nucleus	79.28	82.5
OQU88147	Sorghum	nucleus	79.42	78.96
Zm00001d042272_P003	Maize	nucleus	76.09	78.12
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	70.29	66.62
GSMUA_Achr8P00500_001	Banana	extracellular	25.36	64.1
VIT_14s0068g01090.t01	Wine grape	nucleus	46.52	61.14
KRG94709	Soybean	nucleus	24.2	55.48
GSMUA_Achr8P00490_001	Banana	nucleus	28.26	53.87
TraesCS1A01G241600.2	Wheat	nucleus	62.03	52.26
Bra006226.1-P	Field mustard	nucleus	45.22	52.17
CDX78549	Canola	nucleus	45.51	51.99
CDX70530	Canola	nucleus	45.36	51.91
Solyc02g094520.2.1	Tomato	nucleus	50.58	51.55
KRH20251	Soybean	nucleus, plastid	48.7	50.76
AT5G13960.1	Thale cress	nucleus	45.8	50.64
KRH06819	Soybean	nucleus	51.16	49.03
TraesCS3A01G520700.1	Wheat	nucleus	15.22	36.46
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	23.77	30.89
TraesCS1A01G362000.1	Wheat	nucleus	27.39	27.96
TraesCS3A01G457900.1	Wheat	plastid	21.74	27.73
TraesCS1A01G308300.1	Wheat	nucleus	26.96	27.6
TraesCS5A01G140500.1	Wheat	nucleus	26.96	27.27
TraesCS2A01G235400.1	Wheat	nucleus	25.8	26.57
TraesCS1A01G042900.1	Wheat	nucleus	24.78	26.47
TraesCS4A01G100900.1	Wheat	nucleus	24.93	25.6
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	12.03	25.0
TraesCS3A01G336100.1	Wheat	nucleus	26.96	24.97
TraesCS3A01G385200.1	Wheat	plastid	25.8	24.52
TraesCS4A01G023500.1	Wheat	nucleus	27.54	22.78
TraesCS1A01G117300.1	Wheat	nucleus	28.84	21.01
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	25.51	17.46
TraesCS5A01G194500.1	Wheat	plastid	28.41	16.91
TraesCS2A01G478800.1	Wheat	nucleus	14.64	16.83
TraesCS6A01G226600.1	Wheat	nucleus	15.8	16.01
TraesCS2A01G382000.5	Wheat	nucleus	15.51	15.8
TraesCS5A01G197900.1	Wheat	nucleus	19.57	13.61
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	14.49	13.42
TraesCS6A01G274600.1	Wheat	nucleus	18.26	7.72

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF390	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3A01G441200	EnsemblPlants:TraesCS3A01G441200.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:683432791..683441632

Molecular Weight (calculated)

75822.7 Da

IEP (calculated)

7.626

GRAVY (calculated)

-0.462

Length

690 amino acids

Sequence
(BLAST)

001: MEGMDSVAVM EVAPVPDPLF VGATPLIPAP PESELVLRRS ARCLGKPRVP VYAEPEEPKQ STGRRGRPKK KRDEENQDPA PQVAAKVPRK AAKVEPKERK
101: PMPVVGPEPV PADFTGAAAE DDALGTGKSA KLRVKETLRA FNSHYLHLVQ EEQKRAQAVI QEIAAKGAAK NKDGKKGGEG EAKEKRPSKR PDLKAVTKMQ
201: ENNSFLYTEK VLGPIPGIDV GDQFYSRAEM VVLGIHSHWL NGIDYMGMKY QEKKEYENFT FPMATCIVMS GIYEDDLDKA DEIIYTGQGG NDLLGNHRQI
301: GSQQLNRGNL ALKNSKDNGN LIRVIRGHVA KNSYTGKIYT YDGLYKVVDD WVQKGVQGHV VYKYKLKRLE GQPSLTTTEV RFTRAEAPRK ISELPGLVCD
401: DISGGQENIP IPATNVVDDP PVPPSGFVYS KSLKISKGIK IPSDCAGCDC EGDCANNKNC SCAQLNGSDL PYVSFKNIGR LVEPKAVVFE CGANCSCNRN
501: CVNRTSQQGL QHRLEVFKTA SKGWGVRTWD TILPGAPICE YVGVLKRTEE VDGLLHNNYI FDIDCLQTMK GLDGREKRAG SDMNMPSLHA ENDSEAPPAP
601: EYCIDAGSVG SFARFINHSC NPNLFVQCVL TNHHDVKLAK VMLFAADTIL PLQELCYDYG YVLNSVVSAD GEIVKLPCCC GAPDCRKRLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.