Factsheet for TraesCS3A01G457800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G498000.1	Wheat	nucleus	92.66	76.52
TraesCS3D01G450600.1	Wheat	nucleus	96.8	75.7
TraesCS3A01G457900.1	Wheat	plastid	72.5	71.16
TraesCS4A01G100900.1	Wheat	nucleus	68.55	54.17
Os08t0565700-01	Rice	nucleus	58.76	52.53
TraesCS1A01G042900.1	Wheat	nucleus	61.02	50.15
Zm00001d031858_P001	Maize	nucleus	58.57	47.7
EES14036	Sorghum	nucleus	58.76	46.85
TraesCS2A01G235400.1	Wheat	nucleus	47.46	37.61
TraesCS3A01G520700.1	Wheat	nucleus	15.25	28.12
TraesCS1A01G308300.1	Wheat	nucleus	31.64	24.93
TraesCS5A01G140500.1	Wheat	nucleus	31.45	24.49
TraesCS1A01G362000.1	Wheat	nucleus	31.07	24.41
TraesCS3A01G441200.1	Wheat	nucleus	30.89	23.77
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	14.12	22.59
TraesCS3A01G336100.1	Wheat	nucleus	31.26	22.28
TraesCS3A01G385200.1	Wheat	plastid	29.38	21.49
TraesCS1A01G241600.2	Wheat	nucleus	31.26	20.27
TraesCS4A01G023500.1	Wheat	nucleus	29.94	19.06
TraesCS1A01G117300.1	Wheat	nucleus	29.57	16.58
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	28.44	14.98
TraesCS5A01G194500.1	Wheat	plastid	30.51	13.98
TraesCS2A01G478800.1	Wheat	nucleus	15.44	13.67
TraesCS6A01G226600.1	Wheat	nucleus	16.2	12.63
TraesCS2A01G382000.5	Wheat	nucleus	16.01	12.56
KRH67447	Soybean	nucleus	16.2	11.86
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	16.2	11.54
TraesCS5A01G197900.1	Wheat	nucleus	20.53	10.99
TraesCS6A01G274600.1	Wheat	nucleus	15.63	5.09
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3A01G457800	EnsemblPlants:TraesCS3A01G457800.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:695130624..695132219

Molecular Weight (calculated)

58222.3 Da

IEP (calculated)

7.927

GRAVY (calculated)

-0.387

Length

531 amino acids

Sequence
(BLAST)

001: MVRARVAASQ ADMLQVRNMV RRARLIFEAL RGRCHRNTEH HHAGRNRADM RALSAMIDGE LCLYRDVRIV GPVPGVLVGD AFNYRAELLV VGLHCHTQAG
101: IGYVPASQVS EGHPVATSIV SSGGYLDDHD NGDVLMYTGS GGRPRNGGDH LSDQEFQRGN LALSYSYNYD VEVRVIRCHD CDASPSGKLY VYDGLYKVQS
201: TTYGPGKSGR EVCRFKLVRL PGQDALGSNT WRAARDLTDA LVAKIRPPGY LTMDMSKGKE AVPVPVRNTV DQDVSPLEFE YLACSEFPAP PKPVRRGHKC
301: CIYSKTACSE MSSKCAPSGC ACVKRSGGGG PAYSADGTLV RGRPVVYECG ARCGCPPRSC PNRVTQRGMK HRLEVFRSKE TEWGVRTLDL IQPGAFLCEF
401: TGDVLPADHP RIANANTNAS TGASMEEWGG IVDPRKFPPR WREWGDAPAA VLPDDGEEPP RFAQCPAPGY VIDVSKRRNF AAYISHSRAP NAFVQLVVRG
501: DEDESCPHLM VFAMETIPPM RELSIDYGVD Q

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.