Factsheet for TraesCS3A01G457900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G498100.1	Wheat	nucleus	88.91	76.47
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	71.16	72.5
TraesCS3D01G450700.1	Wheat	nucleus	91.68	70.96
TraesCS4A01G100900.1	Wheat	nucleus	62.66	50.45
Os08t0565700-01	Rice	nucleus	53.05	48.32
TraesCS1A01G042900.1	Wheat	nucleus	55.08	46.13
Zm00001d031858_P001	Maize	nucleus	51.76	42.94
EES14036	Sorghum	nucleus	52.13	42.34
TraesCS2A01G235400.1	Wheat	nucleus	43.25	34.93
TraesCS3A01G520700.1	Wheat	nucleus	14.97	28.12
TraesCS1A01G308300.1	Wheat	nucleus	30.13	24.18
TraesCS1A01G362000.1	Wheat	nucleus	29.02	23.22
TraesCS5A01G140500.1	Wheat	nucleus	28.84	22.87
TraesCS3A01G336100.1	Wheat	nucleus	29.94	21.75
TraesCS3A01G441200.1	Wheat	nucleus	27.73	21.74
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	13.31	21.69
TraesCS3A01G385200.1	Wheat	plastid	28.1	20.94
TraesCS4A01G023500.1	Wheat	nucleus	29.39	19.06
TraesCS1A01G241600.2	Wheat	nucleus	28.47	18.8
TraesCS1A01G117300.1	Wheat	nucleus	27.91	15.95
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	27.17	14.58
TraesCS2A01G478800.1	Wheat	nucleus	15.9	14.33
TraesCS5A01G194500.1	Wheat	plastid	28.1	13.11
TraesCS6A01G226600.1	Wheat	nucleus	16.45	13.07
TraesCS2A01G382000.5	Wheat	nucleus	15.9	12.7
KRH67447	Soybean	nucleus	16.08	12.0
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	16.27	11.81
TraesCS5A01G197900.1	Wheat	nucleus	19.04	10.38
TraesCS6A01G274600.1	Wheat	nucleus	15.53	5.15
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3A01G457900	EnsemblPlants:TraesCS3A01G457900.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:695222611..695239907

Molecular Weight (calculated)

59377.2 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.267

Length

541 amino acids

Sequence
(BLAST)

001: MPPPLRPPSP PPTRPNSPLP PSPPGAPSPP PPSAHANPAI EMVPLRVISA QEDMLQYRPL VLRSRLTFEA LWGRYHRYAE HNPVPGSRNR ANLRALGAMI
101: KGRLCLNRDK RIVGPMPGVF VGDAFNYRVE LLVIGLHNQT QADIGYVPAS KVDGGHPVAT SIVSSGRYLD DHDNGGVLIY TGSGGNLALT YSCNYGIEVR
201: VIRCHDCHAS PSGKLYVYDG LYKVYCTTEI CKFKLVRVPG QEALGNNIWR CARDLINQLD AKILPPDYIT LDMSKGKEAV PVPVRNSVDH DAFPLEFEYL
301: ARPEFPAPPA MPGHKCCINA KTACSETSGC ACVKRSGGGG RAYNADGMLL RGRSVVYRCG ASCGCPASCP NRVTQRGMRH RLEVFRSTET DWGVRTLDLI
401: QPGAFLCEFA GDVLLTDHPR IANANANANT GTSTEEWACF IDPRKFPTRW TEWGYAPAAV LPDDGEEPPR FVQCPAPRYM LDISKRKNIA AYISHSSFVP
501: NAFVQLVVHG DEDESCPHLM VFAMEIIPPM SELSIDYGLD Q

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.