Factsheet for TraesCS3A01G520700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G590300.1	Wheat	nucleus	92.71	42.52
Bra005362.1-P	Field mustard	nucleus	45.83	32.27
VIT_16s0013g00310.t01	Wine grape	nucleus	47.92	29.87
Solyc03g093740.1.1	Tomato	nucleus	29.51	27.69
PGSC0003DMT400054167	Potato	nucleus	44.79	26.76
EES05802	Sorghum	nucleus	70.83	25.92
VIT_16s0013g00650.t01	Wine grape	nucleus	51.74	25.6
Solyc03g093720.1.1	Tomato	nucleus	25.69	24.67
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	28.12	24.4
VIT_00s0309g00020.t01	Wine grape	nucleus	54.86	21.79
PGSC0003DMT400080404	Potato	nucleus, plastid	45.14	21.28
KRG90121	Soybean	nucleus	40.28	21.01
CDX89510	Canola	nucleus	50.0	19.0
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	66.32	18.95
CDY25627	Canola	nucleus	48.26	18.63
CDY31670	Canola	nucleus	46.18	18.55
CDX84255	Canola	nucleus	46.18	18.45
AT2G22740.1	Thale cress	nucleus	48.26	17.59
AT2G35160.3	Thale cress	nucleus	47.57	17.25
Bra030212.1-P	Field mustard	nucleus	45.83	16.67
Solyc03g093760.1.1	Tomato	nucleus	45.83	16.56
Solyc03g093710.1.1	Tomato	nucleus	47.22	16.23
PGSC0003DMT400054163	Potato	extracellular, nucleus	47.22	16.19
PGSC0003DMT400054154	Potato	nucleus	47.57	16.16
TraesCS1A01G308300.1	Wheat	nucleus	36.46	15.58
Solyc03g093700.1.1	Tomato	nucleus	44.79	15.38
PGSC0003DMT400080398	Potato	nucleus	46.88	15.34
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	28.12	15.25
TraesCS1A01G362000.1	Wheat	nucleus	35.76	15.24
TraesCS3A01G441200.1	Wheat	nucleus	36.46	15.22
TraesCS2A01G478800.1	Wheat	nucleus	31.25	15.0
TraesCS1A01G117300.1	Wheat	nucleus	49.31	14.99
TraesCS3A01G457900.1	Wheat	plastid	28.12	14.97
PGSC0003DMT400080391	Potato	nucleus	23.26	14.92
TraesCS5A01G140500.1	Wheat	nucleus	34.72	14.66
KRH77297	Soybean	nucleus	54.51	14.52
Solyc06g060960.1.1	Tomato	nucleus	52.78	14.41
PGSC0003DMT400068351	Potato	nucleus	53.12	14.38
KRH28192	Soybean	nucleus	54.51	14.2
TraesCS2A01G235400.1	Wheat	nucleus	32.99	14.18
TraesCS3A01G336100.1	Wheat	nucleus	36.46	14.09
TraesCS5A01G197900.1	Wheat	nucleus	47.57	13.81
TraesCS3A01G385200.1	Wheat	plastid	34.38	13.64
Solyc08g077940.1.1	Tomato	nucleus	48.96	13.6
TraesCS2A01G382000.5	Wheat	nucleus	31.6	13.44
TraesCS1A01G241600.2	Wheat	nucleus	38.19	13.43
PGSC0003DMT400067504	Potato	nucleus	48.61	13.26
TraesCS6A01G226600.1	Wheat	nucleus	31.25	13.22
TraesCS1A01G042900.1	Wheat	nucleus	29.51	13.16
TraesCS5A01G194500.1	Wheat	plastid	51.04	12.68
TraesCS4A01G100900.1	Wheat	nucleus	29.51	12.65
TraesCS4A01G023500.1	Wheat	nucleus	35.42	12.23
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	30.56	11.81
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	9.72	6.91
TraesCS6A01G274600.1	Wheat	nucleus	28.82	5.09
PGSC0003DMT400092528	Potato	cytosol	1.39	1.87
KRH77260	Soybean	nucleus	2.08	1.23
KRH28232	Soybean	nucleus	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR007728
PFAM:PF00856	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PANTHER:PTHR22884
PANTHER:PTHR22884:SF388	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468
SMART:SM00508	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS3A01G520700	EnsemblPlants:TraesCS3A01G520700.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:737477232..737478098

Molecular Weight (calculated)

32201.2 Da

IEP (calculated)

4.811

GRAVY (calculated)

-0.339

Length

288 amino acids

Sequence
(BLAST)

001: MAEPSNGTFT VDISAGLEKI PISAINSISN EAPATFFYIS HIQYLGKYQL DPPPGCDCVG PCSDSQKCAC VMKNGGKIPF RKIGGLIEEK PLIYECGPSC
101: KCPPTCRNRV GQHGISFRLQ VFKTTSMGWG VRSLDFIPTG RFVCEYIGEL LDNEDAQERD NDEYLFLIGN NYYDVSRWDN LQKTIPSLRN GPGEEEENFF
201: AVDALKCGNL ARFINHSCTP NLFTQNVLCD HDNKGMPHIM LFPCEDIQPL EPLAYDYNYT IDGVHDSEGN IKKKRCLCGS VECSGWLY

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.