Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G307900.1 | Wheat | nucleus | 97.59 | 97.59 |
| TraesCS3A01G295200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 97.59 | 97.59 |
| HORVU3Hr1G075380.1 | Barley | nucleus | 94.28 | 94.56 |
| Os01t0772150-00 | Rice | nucleus | 76.2 | 74.85 |
| EES01534 | Sorghum | nucleus | 75.3 | 73.75 |
| Zm00001d006369_P002 | Maize | nucleus | 74.1 | 72.57 |
| GSMUA_Achr8P20300_001 | Banana | plasma membrane | 57.53 | 59.13 |
| VIT_08s0056g01660.t01 | Wine grape | nucleus | 53.31 | 55.49 |
| CDY50660 | Canola | nucleus | 50.0 | 49.4 |
| CDY51752 | Canola | nucleus | 49.1 | 48.51 |
| Bra031976.1-P | Field mustard | nucleus | 49.4 | 47.54 |
| PGSC0003DMT400046255 | Potato | cytosol | 46.39 | 46.95 |
| AT3G03750.2 | Thale cress | nucleus | 48.49 | 45.48 |
| KRG91550 | Soybean | nucleus | 46.69 | 44.93 |
| Solyc01g068370.2.1 | Tomato | nucleus | 45.78 | 44.57 |
| TraesCS3B01G590300.1 | Wheat | nucleus | 28.01 | 14.81 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 25.6 | 14.14 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 26.51 | 12.92 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 27.41 | 12.82 |
| TraesCS2B01G399300.4 | Wheat | nucleus | 25.9 | 12.7 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 25.6 | 12.61 |
| TraesCS3B01G475200.1 | Wheat | nucleus | 24.7 | 12.48 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 25.0 | 12.31 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 26.2 | 11.71 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 26.2 | 11.71 |
| TraesCS2B01G254700.1 | Wheat | nucleus | 23.49 | 11.59 |
| TraesCS3B01G498100.1 | Wheat | nucleus | 21.69 | 11.45 |
| TraesCS4B01G203900.1 | Wheat | nucleus | 22.89 | 11.23 |
| TraesCS1B01G055800.1 | Wheat | nucleus | 21.39 | 11.08 |
| TraesCS3B01G498000.1 | Wheat | nucleus | 21.39 | 11.04 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 23.8 | 10.9 |
| TraesCS2B01G616200.1 | Wheat | nucleus | 24.1 | 10.85 |
| TraesCS2B01G501300.2 | Wheat | mitochondrion, nucleus | 22.59 | 10.14 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 24.4 | 9.72 |
| TraesCS2B01G409600.1 | Wheat | nucleus | 27.71 | 9.56 |
| TraesCS5B01G185700.3 | Wheat | nucleus | 25.6 | 7.66 |
| TraesCS5B01G190000.1 | Wheat | plastid | 25.6 | 7.45 |
| TraesCS1B01G137100.1 | Wheat | nucleus, plastid | 25.3 | 6.33 |
| TraesCS6B01G302100.2 | Wheat | nucleus | 23.8 | 4.87 |
| Os04t0692900-01 | Rice | nucleus | 4.82 | 3.63 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.170.270.10 | InterPro:AWS_dom | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR006560 |
| InterPro:IPR007728 | PFAM:PF00856 | PFAM:PF05033 | PFscan:PS50280 | PANTHER:PTHR44253 | InterPro:Pre-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00570 | SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS3B01G342100 | EnsemblPlants:TraesCS3B01G342100.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:549023541..549025629
Molecular Weight (calculated)
34962.6 Da
IEP (calculated)
6.973
GRAVY (calculated)
-0.016
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNPTAAGAV SELAELVLPW LPPPDLAAAA SASHAMRAAA SAVTAARAAD SARGLEAFPA PFVNPIDSQP YSYFIYTPFS LIPSAASFNA QPWGCAWSRT
101: LGPTWPRPDL GLPLAGCSCA RGECGGAGCA CADAEAEAAD ASGAGMASLS ECGDGCACGP SCENRRTQRG VTVRLRVVRQ LKKGWALHAA EAIHRGQFVC
201: EYAGEFLTTE EARRRHRLYD ELASVGKLSP ALLVIREHLP SGRVCMRVNI DATKVGNVAR FINHSCDGGN LRPILVRSSG SLLPRLCLFA ARDIVDGEEL
301: AFSYGDAKPN PKGLPCFCES SCCPGVLPAE ET
101: LGPTWPRPDL GLPLAGCSCA RGECGGAGCA CADAEAEAAD ASGAGMASLS ECGDGCACGP SCENRRTQRG VTVRLRVVRQ LKKGWALHAA EAIHRGQFVC
201: EYAGEFLTTE EARRRHRLYD ELASVGKLSP ALLVIREHLP SGRVCMRVNI DATKVGNVAR FINHSCDGGN LRPILVRSSG SLLPRLCLFA ARDIVDGEEL
301: AFSYGDAKPN PKGLPCFCES SCCPGVLPAE ET
001: MQRLRESPPP KTRCLGEASD IIPAADRFLR CANLILPWLN PRELAVVAQT CKTLSLISKS LTIHRSLDAA RSLENISIPF HNSIDSQRYA YFIYTPFQIP
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
Arabidopsis Description
SUVR3Histone-lysine N-methyltransferase SUVR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.