Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G165100.1
TraesCS2B01G191300.1
TraesCS2D01G172200.1
TraesCS4A01G160900.1
TraesCS4B01G160100.1
TraesCS4D01G156000.1
TraesCS5A01G245400.1
TraesCS5B01G242900.1
TraesCS5D01G252200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73100.1 TraesCS2A01G165100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2B01G191300.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2D01G172200.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4A01G160900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4B01G160100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4D01G156000.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5A01G245400.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5B01G242900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5D01G252200.1 AT5G09540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G367200.1 Wheat nucleus 100.0 100.0
TraesCS3D01G329100.1 Wheat nucleus 95.02 95.02
TraesCS3A01G336100.1 Wheat nucleus 95.15 94.9
Os01t0811300-01 Rice nucleus, plasma membrane 72.68 73.37
EES01635 Sorghum nucleus 71.6 71.7
Zm00001d043135_P003 Maize nucleus 70.79 67.52
TraesCS1B01G378900.1 Wheat nucleus 60.03 66.17
TraesCS1B01G319000.1 Wheat nucleus 59.22 65.28
CDY04931 Canola cytosol, extracellular, nucleus 5.38 52.63
Bra009408.1-P Field mustard nucleus 32.71 47.46
TraesCS5B01G138800.1 Wheat nucleus 44.82 46.9
TraesCS4B01G280000.1 Wheat nucleus 44.01 45.1
KRH56252 Soybean nucleus 12.92 45.07
Solyc09g082050.2.1 Tomato nucleus 37.15 42.66
Bra005829.1-P Field mustard nucleus 37.01 42.64
CDY11319 Canola nucleus 37.01 42.64
CDX80930 Canola nucleus 36.74 42.39
Bra028776.1-P Field mustard nucleus 36.2 42.36
AT1G73100.1 Thale cress nucleus 38.09 42.3
AT5G04940.2 Thale cress nucleus 37.95 42.09
Bra009409.1-P Field mustard nucleus 37.55 41.95
CDY59935 Canola nucleus 37.15 41.88
KRH62706 Soybean nucleus 37.55 41.83
VIT_13s0047g00120.t01 Wine grape nucleus 40.11 41.62
CDX68245 Canola nucleus 37.28 41.59
PGSC0003DMT400077329 Potato nucleus 37.55 41.58
CDY11129 Canola nucleus 37.42 41.55
CDY61331 Canola nucleus 37.28 41.41
CDX96449 Canola nucleus 36.61 41.4
KRH13229 Soybean nucleus 37.42 41.31
KRH20576 Soybean nucleus 37.15 41.01
Bra016018.1-P Field mustard nucleus 37.01 40.62
CDX98805 Canola nucleus 35.8 40.61
TraesCS3B01G417400.1 Wheat nucleus 45.36 40.46
KRH66648 Soybean nucleus 38.36 40.25
AT2G05900.1 Thale cress cytoskeleton, cytosol, nucleus 16.69 39.74
CDX98804 Canola nucleus 32.71 39.64
PGSC0003DMT400018512 Potato nucleus 37.69 39.0
Solyc10g077070.1.1 Tomato nucleus 37.42 38.94
VIT_08s0040g00360.t01 Wine grape nucleus 38.49 38.81
CDY14135 Canola nucleus 36.2 37.26
KRG95012 Soybean plastid 23.42 35.66
AT1G17770.1 Thale cress nucleus 31.49 33.77
CDY26218 Canola nucleus 30.69 32.66
CDY66122 Canola nucleus 29.74 30.95
AT2G24740.1 Thale cress nucleus 31.09 30.6
TraesCS2B01G254700.1 Wheat nucleus 26.78 29.57
CDY56214 Canola nucleus 30.96 29.0
TraesCS1B01G055800.1 Wheat nucleus 24.9 28.86
CDX70182 Canola nucleus 37.55 27.57
TraesCS3B01G498100.1 Wheat nucleus 23.15 27.34
TraesCS3B01G498000.1 Wheat nucleus 22.88 26.44
TraesCS3B01G342100.1 Wheat nucleus 11.71 26.2
TraesCS3B01G590300.1 Wheat nucleus 22.07 26.11
TraesCS3B01G475200.1 Wheat nucleus 23.01 26.03
Bra025949.1-P Field mustard nucleus 30.42 25.31
CDY26221 Canola nucleus 30.28 25.14
TraesCS4B01G203900.1 Wheat nucleus 22.88 25.11
Bra004258.1-P Field mustard nucleus 30.69 24.81
TraesCS2B01G409600.1 Wheat nucleus 25.03 19.33
TraesCS5B01G190000.1 Wheat plastid 27.86 18.14
TraesCS1B01G137100.1 Wheat nucleus, plastid 28.26 15.81
TraesCS2B01G503200.1 Wheat nucleus 12.79 15.81
TraesCS6B01G255000.1 Wheat nucleus 14.13 15.42
TraesCS2B01G399300.4 Wheat nucleus 13.46 14.77
TraesCS5B01G185700.3 Wheat nucleus 21.8 14.61
CDY01852 Canola plasma membrane 33.11 13.25
TraesCS2B01G501300.2 Wheat mitochondrion, nucleus 13.06 13.11
TraesCS2B01G616200.1 Wheat nucleus 12.65 12.75
TraesCS6B01G302100.2 Wheat nucleus 16.96 7.77
CDY53193 Canola mitochondrion 0.0 0.0
CDY21127 Canola cytosol 0.0 0.0
CDX86631 Canola cytosol 0.0 0.0
CDX89821 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.7MapMan:12.5.1.16.1Gene3D:2.170.270.10Gene3D:2.30.280.10GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009987
GO:GO:0016043GO:GO:0016571GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plantInterPro:IPR001214InterPro:IPR003105InterPro:IPR003616InterPro:IPR007728InterPro:IPR025794
InterPro:IPR036987PFAM:PF00856PFAM:PF02182PFAM:PF05033PFscan:PS50280PFscan:PS50867
PFscan:PS50868PFscan:PS51015PFscan:PS51575PANTHER:PTHR22884PANTHER:PTHR22884:SF384InterPro:PUA-like_sf
InterPro:Post-SET_domInterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00466SMART:SM00468
InterPro:SRA-YDG_sfInterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697EnsemblPlantsGene:TraesCS3B01G366900EnsemblPlants:TraesCS3B01G366900.1
SEG:seg:::::
Description
No Description!
Coordinates
chr3B:+:579283702..579287431
Molecular Weight (calculated)
80884.6 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.488
Length
743 amino acids
Sequence
(BLAST)
001: MDRTSNFMPT PDQDVLDIQP LRTLAPMFPA PLGVNTFNVP NTTPPLIFVT SAGQFPGGVG APGHPAFRSF AAAFGAQDAY GGQPASSGGQ HDGGGHPASS
101: RRQDGGGGQA TTFADKYAAN GGQTAANGAT NLGASADSPI DVIPISAYRP TPPPVIPLDD DDDDNEHFTG NQTSASGRKI KRPSHLSGYK MSGGLGSDDN
201: NGVKTKRNKT SHRKAGADNE FTSVPLSSSN PREAVEEVLM NFEALRRRHL QLDAAQESTK RPDLKIGAVM MANNLRANIR KRIGVVPGVE IGDIFYFRME
301: LCIIGLHAPT MAGIDYMTHT FGDKDDDSVA VCIVAAGVYE NEDDATDTLV YSGSGGSSKN NEEMHDQKLE RGNLALQMSL SRKNVIRVVR GFKDPGCLGG
401: KVYMYDGLYK IHESWKERTK TGINCFKYKL LREPGQPEGM SIWKMSRKWV ENPGTRGRVL HPDLSSGTEN LPVCLVNDVD SEKGPGLFTY ITQVKYPKPL
501: SSMKPLQGCS CLNACLPSDT DCGCTQFNGG NLPYSSTGLL VCRKNRLHEC GESCQCSVNC RNRVTQKGVR VHFEIFRTGN RGWGLRSWDP IRAGSFICEY
601: VGEVIDESKL NLDGEDDYVF QTVRPGEKTL KWDYVPELRG LQITNNSADT FEPLPIKISA KKMGNIARFM NHSCSPKAFW QPVQFDHGDD GHPHIMFFAL
701: KHIPPMTELT YDYGDIGADS SGIGSPGAKR CLCGSSNCRG YFC
Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)
001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
Arabidopsis Description
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.