Factsheet for TraesCS3B01G413800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

cytosol: 20022921
nucleus: 20022921
plasma membrane: 20022921

gfp PMID: 20022921 doi

X Mao, H Zhang, S Tian, X Chang, R Jing

The National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G381100.1	Wheat	cytosol	99.45	99.45
TraesCS3D01G374300.1	Wheat	cytosol	99.45	99.45
Os01t0869900-01	Rice	cytosol	92.56	93.33
HORVU3Hr1G082690.7	Barley	cytosol	96.14	91.36
KXG33770	Sorghum	cytosol	87.6	88.09
Zm00001d012263_P002	Maize	cytosol	85.95	82.98
Zm00001d042695_P002	Maize	cytosol	88.43	81.89
TraesCS1B01G281100.1	Wheat	cytosol	76.86	77.5
TraesCS2B01G320500.1	Wheat	cytosol	74.93	76.19
TraesCS2B01G630000.1	Wheat	cytosol	76.58	70.56
TraesCS2B01G189600.1	Wheat	cytosol	65.56	67.42
TraesCS2B01G521800.1	Wheat	cytosol	63.09	66.76
TraesCS4B01G079300.1	Wheat	cytosol	64.46	64.82
TraesCS1B01G229400.1	Wheat	cytosol	60.33	64.04
TraesCS5B01G406400.1	Wheat	cytosol	63.64	63.11
TraesCS5B01G075800.1	Wheat	cytosol	62.26	62.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF195	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3B01G413800	EnsemblPlants:TraesCS3B01G413800.1	TIGR:cd14662	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:650797293..650801456

Molecular Weight (calculated)

42179.4 Da

IEP (calculated)

6.156

GRAVY (calculated)

-0.588

Length

363 amino acids

Sequence
(BLAST)

001: MEKYEAVRDI GSGNFGVARL MRNRETRELV AVKCIERGHR IDENVYREII NHRSLRHPNI IRFKEVVLTP TNLMIVMEFA AGGELFERIC DRGRFSEDEA
101: RYFFQQLICG VSYCHHMQIC HRDLKLENVL LDGSAAPRLK ICDFGYSKSS VLHSRPKSAV GTPAYIAPEV LSRREYDGKL ADVWSCGVTL YVMLVGGYPF
201: EDQDDPKNIR KTIQRIMSVQ YTIPDHVHIS MECRQLMARI FVNVPSKRIT MREIKNHPWF LKNLPRELTE TAQAMYFRRD NAVPSFSEQT SEEIMKIVQE
301: ARTMPKSSRP SYGWGDEGSD DEEEKEEEER PEVAEEEEED EYDKRVKEVH ASGELRMSSL RIS

Best Arabidopsis Sequence Match ( AT1G10940.1 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS

Arabidopsis Description

ASK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.