Factsheet for TraesCS3B01G475200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G433900.1	Wheat	nucleus	98.48	93.77
TraesCS3A01G441200.1	Wheat	nucleus	98.33	93.62
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	96.65	82.9
Os01t0927000-01	Rice	nucleus	79.15	78.43
OQU88147	Sorghum	nucleus	79.76	75.5
Zm00001d042272_P003	Maize	nucleus	76.41	74.7
GSMUA_Achr8P00500_001	Banana	extracellular	26.48	63.74
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	70.32	63.46
VIT_14s0068g01090.t01	Wine grape	nucleus	45.97	57.52
KRG94709	Soybean	nucleus	25.42	55.48
CDX70530	Canola	nucleus	45.36	49.42
Bra006226.1-P	Field mustard	nucleus	44.9	49.33
CDX78549	Canola	nucleus	45.05	49.01
Solyc02g094520.2.1	Tomato	nucleus	50.08	48.6
GSMUA_Achr8P00490_001	Banana	nucleus	26.64	48.34
AT5G13960.1	Thale cress	nucleus	45.66	48.08
KRH20251	Soybean	nucleus, plastid	48.1	47.73
KRH06819	Soybean	nucleus	50.68	46.25
TraesCS1B01G378900.1	Wheat	nucleus	26.79	26.11
TraesCS1B01G319000.1	Wheat	nucleus	26.18	25.52
TraesCS3B01G590300.1	Wheat	nucleus	23.9	25.0
TraesCS3B01G342100.1	Wheat	nucleus	12.48	24.7
TraesCS1B01G055800.1	Wheat	nucleus	24.05	24.65
TraesCS2B01G254700.1	Wheat	nucleus	24.81	24.22
TraesCS5B01G138800.1	Wheat	nucleus	25.72	23.8
TraesCS3B01G498000.1	Wheat	nucleus	23.29	23.79
TraesCS4B01G280000.1	Wheat	nucleus	26.03	23.59
TraesCS4B01G203900.1	Wheat	nucleus	23.9	23.19
TraesCS3B01G366900.1	Wheat	nucleus	26.03	23.01
TraesCS3B01G367200.1	Wheat	nucleus	26.03	23.01
TraesCS3B01G498100.1	Wheat	nucleus	21.92	22.89
TraesCS3B01G417400.1	Wheat	nucleus	26.33	20.77
TraesCS2B01G409600.1	Wheat	nucleus	24.96	17.05
TraesCS2B01G503200.1	Wheat	nucleus	15.37	16.81
TraesCS5B01G190000.1	Wheat	plastid	28.16	16.21
TraesCS6B01G255000.1	Wheat	nucleus	16.44	15.86
TraesCS2B01G399300.4	Wheat	nucleus	16.13	15.66
TraesCS2B01G616200.1	Wheat	nucleus	16.29	14.52
TraesCS1B01G137100.1	Wheat	nucleus, plastid	28.92	14.31
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	15.07	13.38
TraesCS5B01G185700.3	Wheat	nucleus	22.22	13.16
TraesCS6B01G302100.2	Wheat	nucleus	17.96	7.27

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008327	GO:GO:0009987	GO:GO:0010216	GO:GO:0010385
GO:GO:0010428	GO:GO:0010429	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018022
GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	GO:GO:0046974	GO:GO:0051567	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PANTHER:PTHR22884
PANTHER:PTHR22884:SF390	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3B01G475200	EnsemblPlants:TraesCS3B01G475200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:723787052..723795232

Molecular Weight (calculated)

72257.5 Da

IEP (calculated)

7.037

GRAVY (calculated)

-0.452

Length

657 amino acids

Sequence
(BLAST)

001: MDAMDSVAVM EVAPVPDPLF VGATPLIPAP PESELVLRRS ARCLGRPRLP VYAEPEEPKQ SAGRRGRPKK KRDEENQDPA PQVAAKVPRK TAKVEPKERK
101: PMPVVGPEPV PADFTGAAAE DDALGTGKSA KLRVKETLRA FNSHYLHLVQ EEQKRAQAVI QEIAAKGAAK NKDGKKGGEG EAKEKRPSKR PDLKAITKMQ
201: ENNSFLYTEK VLGPIPGIDV GDQFYSRAEM VVLGIHSHWL NGIDYMGMKY QEKKEYENFT FPMATCIVMS GIYEDDLDKA DEIIYTGQGG NDLLGNHRQI
301: GSQQLNRGNL ALKVVDDWVQ KGVQGHVVYK YKLKRLEGQP SLTTTEVRFT RAEAPRKISE LPGLVCDDIS GGQENIPIPA TNVVDDPPVP PSGFVYSKSL
401: KISKGMKIPS DCAGCDCEGD CANNKNCSCA QLNGSDLPYV SFKNIGRLVE PKAVVFECGA NCSCNRNCVN RTSQQGLQHR LEVFKTASKG WGVRTWDTIL
501: PGAPICEYVG VLRRTEEVDG LLHNNYIFDI DCLQTMKGLD GREKRAGSDM NMPSLHAEND SEAPPAPEYC IDAGSIGSFA RFINHSCNPN LFVQCVLTNH
601: HDVKLAKVML FAADTILPLQ ELCYDYGYVL NSVVSADGEI VKLPCYCGAP DCRKRLY

Best Arabidopsis Sequence Match ( AT2G22740.1 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.