Factsheet for TraesCS3D01G329100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G165100.1
TraesCS2B01G191300.1
TraesCS2D01G172200.1
TraesCS4A01G160900.1
TraesCS4B01G160100.1
TraesCS4D01G156000.1
TraesCS5A01G245400.1
TraesCS5B01G242900.1
TraesCS5D01G252200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	TraesCS2A01G165100.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS2B01G191300.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS2D01G172200.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4A01G160900.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4B01G160100.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4D01G156000.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5A01G245400.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5B01G242900.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5D01G252200.1	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G336100.1	Wheat	nucleus	95.96	95.7
TraesCS3B01G367200.1	Wheat	nucleus	95.02	95.02
TraesCS3B01G366900.1	Wheat	nucleus	95.02	95.02
Os01t0811300-01	Rice	nucleus, plasma membrane	72.68	73.37
EES01635	Sorghum	nucleus	71.33	71.43
Zm00001d043135_P003	Maize	nucleus	70.79	67.52
TraesCS1D01G366800.1	Wheat	nucleus	60.16	66.12
TraesCS1D01G307700.1	Wheat	nucleus	59.49	65.58
CDY04931	Canola	cytosol, extracellular, nucleus	5.52	53.95
Bra009408.1-P	Field mustard	nucleus	32.44	47.07
TraesCS5D01G152000.1	Wheat	nucleus	43.34	46.8
KRH56252	Soybean	nucleus	13.06	45.54
Bra005829.1-P	Field mustard	nucleus	36.61	42.17
CDY11319	Canola	nucleus	36.61	42.17
Bra028776.1-P	Field mustard	nucleus	35.94	42.05
AT5G04940.2	Thale cress	nucleus	37.82	41.94
CDX80930	Canola	nucleus	36.34	41.93
TraesCS4D01G278500.1	Wheat	nucleus	46.16	41.88
AT1G73100.1	Thale cress	nucleus	37.69	41.85
Solyc09g082050.2.1	Tomato	nucleus	36.34	41.73
Bra009409.1-P	Field mustard	nucleus	37.28	41.65
CDY59935	Canola	nucleus	36.74	41.43
CDX68245	Canola	nucleus	37.01	41.29
CDY11129	Canola	nucleus	37.15	41.26
KRH62706	Soybean	nucleus	37.01	41.23
CDY61331	Canola	nucleus	37.01	41.11
VIT_13s0047g00120.t01	Wine grape	nucleus	39.57	41.06
CDX96449	Canola	nucleus	36.2	40.94
KRH13229	Soybean	nucleus	37.01	40.86
KRH20576	Soybean	nucleus	36.74	40.56
PGSC0003DMT400077329	Potato	nucleus	36.61	40.54
CDX98805	Canola	nucleus	35.67	40.46
Bra016018.1-P	Field mustard	nucleus	36.61	40.18
KRH66648	Soybean	nucleus	37.95	39.83
CDX98804	Canola	nucleus	32.57	39.48
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	16.55	39.42
Solyc10g077070.1.1	Tomato	nucleus	37.01	38.52
PGSC0003DMT400018512	Potato	nucleus	37.01	38.3
TraesCS3D01G378200.1	Wheat	plastid	35.26	38.25
VIT_08s0040g00360.t01	Wine grape	nucleus	37.82	38.13
CDY14135	Canola	nucleus	35.94	36.98
KRG95012	Soybean	plastid	22.75	34.63
AT1G17770.1	Thale cress	nucleus	31.9	34.2
CDY26218	Canola	nucleus	30.96	32.95
AT2G24740.1	Thale cress	nucleus	31.49	30.99
CDY66122	Canola	nucleus	29.61	30.81
TraesCS2D01G240000.1	Wheat	nucleus	27.19	29.93
TraesCS1D01G043400.1	Wheat	nucleus	25.17	29.22
CDY56214	Canola	nucleus	31.09	29.13
CDX70182	Canola	nucleus	37.15	27.27
TraesCS3D01G307900.1	Wheat	nucleus	11.98	26.81
TraesCS3D01G433900.1	Wheat	nucleus	24.5	26.38
TraesCS3D01G450600.1	Wheat	nucleus	23.69	25.92
Bra025949.1-P	Field mustard	nucleus	30.69	25.53
CDY26221	Canola	nucleus	30.55	25.36
Bra004258.1-P	Field mustard	nucleus	30.82	24.92
TraesCS3D01G450700.1	Wheat	nucleus	23.01	24.46
TraesCS4D01G204500.1	Wheat	nucleus	22.21	24.3
TraesCS1D01G241500.1	Wheat	nucleus	24.76	22.47
TraesCS2D01G389100.1	Wheat	nucleus	25.3	19.58
TraesCS5D01G197700.2	Wheat	plastid	29.34	19.22
TraesCS1D01G118300.1	Wheat	nucleus, plastid	28.13	17.08
TraesCS2D01G478100.1	Wheat	nucleus	13.32	16.56
TraesCS6D01G208400.1	Wheat	nucleus	14.54	15.86
TraesCS2D01G378500.3	Wheat	nucleus	14.13	15.49
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	14.4	14.5
TraesCS2D01G566400.1	Wheat	nucleus	13.73	13.84
TraesCS5D01G193000.2	Wheat	nucleus	20.46	13.54
CDY01852	Canola	plasma membrane	33.24	13.31
TraesCS6D01G254900.2	Wheat	nucleus	17.23	7.93
TraesCS5D01G192900.1	Wheat	cytosol	0.81	3.68
CDX86631	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF384	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3D01G329100	EnsemblPlants:TraesCS3D01G329100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:442039453..442041684

Molecular Weight (calculated)

80939.6 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.457

Length

743 amino acids

Sequence
(BLAST)

001: MDRTSNFMPT PDQDVLDIQP LRTLAPMFPA PLGVNTFNVP NTTPPLIFVT SAGQFPGGFG APGHPAFRSF AAAFGAQDAY GGQPASSRGQ DAGRGQPASS
101: RGQDAGGGQA TTFADKYAAN GGQTAANGAT NLGASADSPI DVIPISAYRP TPPPVIPLDD DDDDNEHFTS NQTSASGRKI KRPSHLSGYK MSGGLGSDDN
201: NGVKTKRNKT SHRKAGAGNE FTSVPLSSSN PREAVEEVLM NFEALRRRHL QLDVAQESTK RPDLKVGAVM LAHNLRANIA RRIGVVPGIE IGDIFYFRME
301: LCIIGLHAPT MAGIDYMTHT FGDKGDDSVA ICIVAAGVYE NEDDATDTLV YSGSGGSSKN NEEMHDQKLE RGNLALQMSL SRKNVIRVVR GFKDPGCLGG
401: KVYMYDGLYK IHESWKERTK TGIQCFKYKL LREPGQPEGM SIWKMSRKWV ENPATRGRVL HPDLSSGTEN LPVCLVNDID SEKGPGLFTY ITQVKYPKPL
501: SSMKPLQGCS CLNACLPSDT DCGCAEFNGG NLPYSSTGLL VCRKNRLYEC GESCQCSVNC RNRVTQKGIR VHFEIFRTGN RGWGLRSWDP IRAGSFICEY
601: VGEVIDESKL NLNGEDDYLF QTVSPCEKTL KWNYVPELMG EQITNNSDDT FEPLPIKISA KKMGNVSRFM NHSCSPNAFW QPVQFDHGDD GHPHIMFFAL
701: KHIPPMTELT YDYGDIGADS SGIGSPGAKR CLCGSSNCRG YFC

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.