Factsheet for TraesCS3D01G376400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G043900.1	Wheat	endoplasmic reticulum, golgi	59.96	91.14
TraesCS3D01G040200.1	Wheat	endoplasmic reticulum, golgi	83.27	79.96
TraesCS2D01G261100.1	Wheat	endoplasmic reticulum, golgi	59.21	60.34
TraesCS5D01G407400.1	Wheat	endoplasmic reticulum	56.39	57.92
TraesCS5D01G407300.1	Wheat	endoplasmic reticulum, golgi	55.64	57.36
TraesCS5D01G407500.1	Wheat	endoplasmic reticulum, peroxisome, plastid	56.58	55.74
TraesCS5D01G407200.1	Wheat	endoplasmic reticulum	53.2	54.63
TraesCS3D01G521300.1	Wheat	cytosol	18.23	51.6
TraesCS3D01G521200.1	Wheat	cytosol	17.86	50.53
PGSC0003DMT400030215	Potato	cytosol	24.06	50.0
TraesCS2D01G058900.1	Wheat	endoplasmic reticulum, golgi	44.55	45.4
VIT_18s0001g09510.t01	Wine grape	endoplasmic reticulum	41.35	44.09
VIT_09s0002g06450.t01	Wine grape	endoplasmic reticulum	41.54	43.59
VIT_18s0001g09500.t01	Wine grape	endoplasmic reticulum	40.23	42.97
Solyc12g088460.1.1	Tomato	endoplasmic reticulum	40.98	42.83
PGSC0003DMT400030214	Potato	endoplasmic reticulum	40.98	42.83
TraesCS5D01G084100.1	Wheat	endoplasmic reticulum	42.11	42.67
VIT_09s0002g06440.t01	Wine grape	endoplasmic reticulum	40.6	42.52
PGSC0003DMT400055478	Potato	endoplasmic reticulum	40.23	42.13
Solyc12g088510.1.1	Tomato	endoplasmic reticulum	40.23	42.04
VIT_09s0002g06470.t01	Wine grape	endoplasmic reticulum	40.41	41.99
PGSC0003DMT400039833	Potato	golgi	40.41	41.99
Solyc04g078290.2.1	Tomato	nucleus	40.04	41.6
TraesCS2D01G521700.1	Wheat	endoplasmic reticulum	39.66	41.13
PGSC0003DMT400039835	Potato	cytosol	28.57	41.08
TraesCS2D01G521800.1	Wheat	endoplasmic reticulum, plasma membrane	39.29	40.58
TraesCS5D01G084400.1	Wheat	endoplasmic reticulum, plastid, vacuole	38.72	40.16
VIT_09s0002g06480.t01	Wine grape	endoplasmic reticulum	35.53	40.13
TraesCS5D01G084200.1	Wheat	cytosol, endoplasmic reticulum, golgi	41.17	39.89
TraesCS5D01G084300.1	Wheat	endoplasmic reticulum, golgi, plastid	37.22	39.52
VIT_18s0001g09520.t01	Wine grape	golgi	38.16	38.74
TraesCS6D01G110900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.71	37.62
PGSC0003DMT400055477	Potato	endoplasmic reticulum	36.28	37.62
Solyc04g078270.2.1	Tomato	endoplasmic reticulum	36.28	37.62
TraesCS3D01G521100.1	Wheat	endoplasmic reticulum, golgi	21.24	36.45
PGSC0003DMT400055474	Potato	endoplasmic reticulum, golgi	22.56	30.3

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF194	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G376400	EnsemblPlants:TraesCS3D01G376400.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:489744723..489746407

Molecular Weight (calculated)

58604.6 Da

IEP (calculated)

8.949

GRAVY (calculated)

-0.081

Length

532 amino acids

Sequence
(BLAST)

001: MELGAYYSMV MSNLMLVLTV SMVSATYLLM RKMRGKKRLP PGPGLALPLV GHLHLLREKP LHVTLAGLAA RHGPVLSLRL GRRDAVVVTS LRLAKECFST
101: ELDVNFANRP RFPSAREVSF GYTGLSAASY GPHWRSMRRI ATVHLLSARR VDLMSDATIA GETGAMVRRL ARAAAAASGG VTRVELKRNL FELSHGVLME
201: AIAGAKGTRD GSDADMSKEA HEFKKVVDEI VPLLGMANLH DHLPGPLRWL DFGGVRRRLT ELVNRRNALM HGLIDAERQR RPQEDHATDE LLPESKSMIG
301: VMLSLQESDP QQYTDTFIAA LVTNLFGGGT VTTSATMEWA MSLLLNHPDA LQKAREEVSA RVGHARLLSR EDLPHLPYLQ CIIIETLRLY PAAPLLAPHE
401: SSADCSLHGY HVPAGTMLLA NAYAIHRDPS VWDDPEEFRP ERFDVNGADG QGQQGMMMLP FGMGRRRCPG ESLALRTMGL VLGTLIQCFD WSRVAGAEVD
501: MTQASAKILY KAVPLVALCK PHDNMQTMLH KI

Best Arabidopsis Sequence Match ( AT4G37330.1 )
(BLAST)

001: MDLNQILILS FLSLFTLAIF LLTRSKRKLN LPPSPAISLP VIGHLHLLKP PLHRTFLSLS KSIGNAPVFH LRLGNRLVYV ISSRSIAEEC FTKNDVVLAN
101: RPKFTISKHL GYNATYLLSA SYGDHWRNLR RIAAVEIFST HRLNSFLYIR KDEIRRLISH LSRDSLHGFV EVEMKTLLTN LASNTTIRML AGKRYFGEDN
201: DDAKLVKNLV SEAVTSAGAG NPIDYLSILR WVSSYEKRIK NLGNRFDTFL QKLVDEKRAE KEKGETMIDH LLALQDIQPD YYTDVIIKGI ILTLIIAGTD
301: TSSVTLEWAM SNLLNHPEIL KKARMEIDEK VGLDRLVDES DIVNLSYLQS IVLETLRMYP AVPLLLPHLS SEDCKVGGYD IPSGTMVLTN AWAMHRDPEV
401: WEDPEIFKPE RFEKEGEAEK LISFGMGRRA CPGAGLAHRL INQALGSLVQ CFEWERVGED FVDMTEDKGA TLPKAIPLRA MCKARSIVDK LI

Arabidopsis Description

CYP81D4At4g37330 [Source:UniProtKB/TrEMBL;Acc:O23155]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.