Factsheet for TraesCS3D01G450700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G498100.1	Wheat	nucleus	82.69	91.89
TraesCS3A01G457900.1	Wheat	plastid	70.96	91.68
TraesCS3D01G450600.1	Wheat	nucleus	69.38	71.43
TraesCS4D01G204500.1	Wheat	nucleus	58.66	60.38
Os08t0565700-01	Rice	nucleus	43.92	51.68
TraesCS1D01G043400.1	Wheat	nucleus	46.92	51.25
Zm00001d031858_P001	Maize	nucleus	45.64	48.93
EES14036	Sorghum	nucleus	46.21	48.5
TraesCS2D01G240000.1	Wheat	nucleus	36.48	37.78
TraesCS1D01G307700.1	Wheat	nucleus	25.04	25.96
TraesCS1D01G366800.1	Wheat	nucleus	24.32	25.15
TraesCS5D01G152000.1	Wheat	nucleus	24.32	24.71
TraesCS3D01G433900.1	Wheat	nucleus	23.18	23.48
TraesCS3D01G329100.1	Wheat	nucleus	24.46	23.01
TraesCS3D01G307900.1	Wheat	nucleus	10.44	21.99
TraesCS4D01G278500.1	Wheat	nucleus	25.04	21.37
TraesCS3D01G378200.1	Wheat	plastid	20.89	21.31
TraesCS1D01G241500.1	Wheat	nucleus	23.46	20.02
TraesCS2D01G389100.1	Wheat	nucleus	22.17	16.15
TraesCS2D01G478100.1	Wheat	nucleus	12.73	14.88
TraesCS5D01G197700.2	Wheat	plastid	23.89	14.73
TraesCS1D01G118300.1	Wheat	nucleus, plastid	25.32	14.46
TraesCS2D01G378500.3	Wheat	nucleus	12.88	13.27
TraesCS6D01G208400.1	Wheat	nucleus	12.59	12.92
TraesCS2D01G566400.1	Wheat	nucleus	13.3	12.62
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	13.3	12.6
KRH67447	Soybean	nucleus	12.88	12.41
TraesCS5D01G193000.2	Wheat	nucleus	15.45	9.62
TraesCS6D01G254900.2	Wheat	nucleus	12.88	5.57
KRH67444	Soybean	cytosol	0.0	0.0
TraesCS5D01G192900.1	Wheat	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS3D01G450700	EnsemblPlants:TraesCS3D01G450700.1	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:558937737..558939836

Molecular Weight (calculated)

74954.2 Da

IEP (calculated)

6.944

GRAVY (calculated)

-0.302

Length

699 amino acids

Sequence
(BLAST)

001: MAPAPVLLPT PDPSATPDPD AAPQAPAAAA AVPLTPEHCT APSRLAARSD ADAGAPTIPL TPELIALLRG ELEPSPEDHS DFALRLRFTQ QRLDAISPSL
101: PSATPPPAPP QRPQSPLPPP TSHVPPPPPP PRAHADPLRA SSSAASLPSA MPPPLRPPSP PPTRPNSPLP PPPPRAPSPP PPSAHANPAM EMVQLRVISA
201: QEDTLHYRPL VRRARLAFEA LWGRYHRNAE NNPVPGSRNR ADLRALGAMI KGRLCLNRDK RIVGPVPGVF VGDAFNYRAE LLVVGLHNQT QADIGYVPAS
301: KLDGGHPVAT SIVSSGRYLD DHDNGGVLIY TGSGGSPPNG GNLALTYSCN YGIEVRVIRC HDCHASPSGK LYVYDGLYKV FSTSEVCKFK LVRVPGQEAL
401: GSNTWRSARD LINQLDAKIQ PPDYITLDMS KGKEAVPVPV RNSVDHDVFP LQFEYLARPE FPAPPAMPGH KCCTCINAKT ACSETAGCAC VKRSGGGGPA
501: YNADGMLLRG RPVVYECGAS CGCPASCPNR VTQRGTRHRL EVFRSTETDW GVRTLDLIQP GAFLCEFAGD VLLADDPRIA NANANANTGA STEEWACFID
601: PRKFPTRWME WGYAPAAVLP ADGEEPPRFV QCPAPGYVLD ISKRKNIAAY ISHSSFVPNA FVQLVVRGDE DESCPHLMVF AMEIIPPMSE LSIDYGLDQ

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.