Factsheet for TraesCS4A01G054000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G054300.1	Wheat	cytosol	99.3	99.3
TraesCS4D01G250600.1	Wheat	cytosol	40.65	85.71
TraesCS4A01G047300.1	Wheat	plastid	46.03	50.9
KXG37379	Sorghum	plastid	39.25	50.76
TraesCS4A01G049400.1	Wheat	mitochondrion	47.2	50.25
EER93315	Sorghum	cytosol	38.55	49.4
EER91105	Sorghum	cytosol	41.59	49.31
TraesCS4A01G047200.1	Wheat	mitochondrion	45.56	49.24
TraesCS4A01G046400.1	Wheat	mitochondrion	45.56	49.24
Zm00001d013575_P001	Maize	plastid	40.42	48.46
Zm00001d013578_P001	Maize	plastid	40.42	48.46
TraesCS5A01G255500.1	Wheat	cytosol	25.7	48.25
Zm00001d033429_P001	Maize	cytosol, mitochondrion, nucleus, plastid	39.72	48.02
Zm00001d033430_P001	Maize	cytosol, nucleus, plastid	39.72	47.89
EER93705	Sorghum	plastid	40.19	47.65
TraesCS3A01G133000.1	Wheat	cytosol, nucleus, plastid	42.06	47.24
TraesCS7A01G249800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	42.52	47.03
TraesCS3A01G178400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	40.89	45.57
Zm00001d013091_P001	Maize	cytosol	34.81	45.57
Zm00001d033440_P001	Maize	cytosol	38.55	45.08
Zm00001d033433_P001	Maize	cytosol, mitochondrion, nucleus	38.08	44.54
Zm00001d033438_P001	Maize	cytosol	38.08	44.54
Zm00001d033442_P001	Maize	mitochondrion	39.95	42.64
Zm00001d033434_P001	Maize	cytosol, mitochondrion, nucleus	38.32	41.52
TraesCS1A01G091900.1	Wheat	cytosol	16.82	40.45
TraesCS1A01G092000.1	Wheat	cytosol	16.82	40.45
KXG37930	Sorghum	cytosol, plastid	38.32	40.39
TraesCS3A01G247700.1	Wheat	cytosol, plastid	33.18	39.34
Solyc04g049530.1.1	Tomato	nucleus, plasma membrane, vacuole	7.48	39.02
TraesCS2A01G502000.1	Wheat	plastid	33.64	37.89
TraesCS5A01G231900.1	Wheat	cytosol	33.41	37.73
TraesCS7A01G437400.1	Wheat	mitochondrion	21.03	37.66
TraesCS5A01G167000.1	Wheat	cytosol	33.88	37.56
TraesCS1A01G359100.1	Wheat	cytosol	28.27	37.12
TraesCS1A01G092300.1	Wheat	cytosol, mitochondrion, plastid	26.4	35.65
TraesCS5A01G255800.1	Wheat	cytosol	27.34	35.35
TraesCS1A01G092500.1	Wheat	cytosol	25.93	35.02
TraesCS5A01G052500.1	Wheat	cytosol	25.0	34.19
TraesCS1A01G315100.1	Wheat	plastid	27.8	33.9
TraesCS3A01G031000.1	Wheat	cytosol	25.93	31.36
TraesCS7A01G315800.1	Wheat	cytosol	24.53	28.85
TraesCS7A01G314600.1	Wheat	mitochondrion	24.53	28.77
TraesCS7A01G314700.1	Wheat	cytosol	24.07	28.53
Zm00001d033436_P001	Maize	cytosol	38.78	25.62
TraesCS2A01G480600.1	Wheat	cytosol	26.4	24.89
KXG37871	Sorghum	plastid	41.59	15.4

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF195	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4A01G054000	EnsemblPlants:TraesCS4A01G054000.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:45467179..45469771

Molecular Weight (calculated)

47554.1 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.277

Length

428 amino acids

Sequence
(BLAST)

001: MAVGKRPAAG DGTDQEPEIS CCKRRRVRIG TTAAFEFDDT PCLGEGSFGA VLKARHRVTG KTVAIKVLRS NGDLAAANKE MQDEAGFLEA CTPNPYVVGS
101: HGLFRDPETY SLCLAMDYVG PNLHAFLSER PPLPEAIVKG YMWQLLTGAN KMHRQHILHR DIKPHNVLVE EGGKILKLCD LGLAMSLKTA RMPYEFAGTV
201: PYMAPEMLVG KPDYDAGVDV WSLGCVMAEM LTGERLFKAD KKDDRTAQLS AILRVLGFPD ETTWPEFFAA EVPRVFSYAQ AQQHNTNTLG NLFPRETLSH
301: DGFQVLKGLL ECNPARRLTT ADALQLPWFA PKLHTDDDVS ESLPPTRRNV VRIKIVPAGT LKKKTVLRIK FTPPATPKKN LRQRIKVIPL ATPGTKKDLR
401: QRIKIIPPAT PQMKNVLRIP LAMWNKAM

Best Arabidopsis Sequence Match ( AT1G20930.1 )
(BLAST)

001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL

Arabidopsis Description

CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.