Factsheet for TraesCS4A01G100900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G204500.1	Wheat	nucleus	96.13	95.14
TraesCS4B01G203900.1	Wheat	nucleus	95.54	94.83
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	54.17	68.55
TraesCS3A01G457900.1	Wheat	plastid	50.45	62.66
TraesCS1A01G042900.1	Wheat	nucleus	55.51	57.74
Os08t0565700-01	Rice	nucleus	49.85	56.4
Zm00001d031858_P001	Maize	nucleus	53.42	55.06
EES14036	Sorghum	nucleus	53.57	54.05
TraesCS2A01G235400.1	Wheat	nucleus	39.73	39.85
TraesCS3A01G520700.1	Wheat	nucleus	12.65	29.51
TraesCS1A01G308300.1	Wheat	nucleus	25.89	25.82
TraesCS5A01G140500.1	Wheat	nucleus	26.04	25.66
TraesCS1A01G362000.1	Wheat	nucleus	25.6	25.44
TraesCS3A01G441200.1	Wheat	nucleus	25.6	24.93
TraesCS3A01G385200.1	Wheat	plastid	25.15	23.28
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	11.31	22.89
TraesCS3A01G336100.1	Wheat	nucleus	25.15	22.68
TraesCS1A01G241600.2	Wheat	nucleus	26.19	21.49
TraesCS4A01G023500.1	Wheat	nucleus	26.49	21.34
TraesCS1A01G117300.1	Wheat	nucleus	24.55	17.42
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	23.07	15.38
TraesCS2A01G478800.1	Wheat	nucleus	12.95	14.5
TraesCS5A01G194500.1	Wheat	plastid	24.4	14.15
TraesCS6A01G226600.1	Wheat	nucleus	13.69	13.51
TraesCS2A01G382000.5	Wheat	nucleus	13.54	13.44
KRH67447	Soybean	nucleus	13.84	12.83
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	13.69	12.35
TraesCS5A01G197900.1	Wheat	nucleus	18.01	12.2
TraesCS6A01G274600.1	Wheat	nucleus	14.14	5.82
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS4A01G100900	EnsemblPlants:TraesCS4A01G100900.1	SEG:seg

Description

No Description!

Coordinates

chr4A:-:113330130..113332148

Molecular Weight (calculated)

72639.2 Da

IEP (calculated)

8.773

GRAVY (calculated)

-0.372

Length

672 amino acids

Sequence
(BLAST)

001: MASAPRRPLL VPKPDPDAPA PTAELCAALL RRVSAKPDPD ADALPAPTQT TPLTPDLCAA LRRQLDPSPD DHADFAHSLR LAQRRLDAIS ASLSSTPPQP
101: SPPPPPPAPR SASLSSTPPR PPPAPRSADP ARASSSTATA SAKGKKRARG TAGPEMVRAT VTAEADHLEV RTLVRRARLT FEAVRGIYHR GGRMRADMTA
201: LSTMLSQGLC LYRDVRIVGA IPGVFVGDVF SYRAELIVVG LHNQTQAGIG FIPANLVSEG HPVATSIVSS GGYLDDHDNG EVLIYTGSGG RPRHGVEHNT
301: DQEFERGNLA LAYSHKYGVE VRVIRCHDCD TSPSAKLYVY DGLYKVDSIT YGPGKSGHEV CKFKLVRIPG QAPLGSKIWR SARDLTNMLD SNIRPRGYVT
401: RDLSKGKELI RVPIFNNVDR DISPLGFEYI SRPDFPVLPR PVRRFRCCQY ATAACGGSSS SGSCACVRKN GGGGPAYNAD GTLVRGRPVV YECGAQCGCP
501: ASCSNRVTQR GMQHRLEVFR SRQTDWGVRA LDLIQPGAFV CEFSGDVVTV DDDGHHAGNA GGASTEWGGI VDPRKFPARW REWGDASAAT LPDDAEEPPR
601: FAHLAGPRPR YVLDVSRRRN FAPYISHSSA PNVFVQLVLR ADDNESYPRL MLFAMDTIPP LRELSIDYGI GP

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.