Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 2
- golgi 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G053300.1 | Wheat | vacuole | 71.43 | 70.18 |
| HORVU7Hr1G009700.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 60.12 | 61.59 |
| TraesCS7A01G053200.1 | Wheat | vacuole | 45.83 | 37.56 |
| TraesCS4A01G438900.1 | Wheat | vacuole | 45.24 | 37.07 |
| TraesCS7A01G465400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 32.14 | 24.32 |
| TraesCS6A01G092600.1 | Wheat | mitochondrion | 30.95 | 18.57 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G438800.1 | EnsemblPlantsGene:TraesCS4A01G438800 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4A:-:708581130..708581728
Molecular Weight (calculated)
18300.8 Da
IEP (calculated)
4.637
GRAVY (calculated)
0.940
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMLHEEELS ELAGDISVYV LLAAMLLVFV AGQACTGGWG CAVAHVVTKI WAQAILVLLL LPLALVLFFR RAAGCSSKAA DAESLSVKDV EERPYDFSLA
101: LMWLLLVAML GTFAFVFYMY GYPDLADLFG HAVLVVVFLC EAFLYVRAAL SLWKMNPTPK PSSMVAAE
101: LMWLLLVAML GTFAFVFYMY GYPDLADLFG HAVLVVVFLC EAFLYVRAAL SLWKMNPTPK PSSMVAAE
001: MGRSNSQCPS HWILLCFFIS SQFWGFSLPT SIIQQNLEGF KDPEDGFHEI HCSRERSRVA WKIIQEYLMP YVEKERYQLP STCRVHRDND IYREQEEHKL
101: RSDINEWRCG FCKKAFYEEK YLDKHFDSRH YNLLNASHGK CLSDLCGALH CDLVVDTARL KSKCNPAAAA KNRHLCESLA NSCFPVNKGS SANRLHDFFL
201: RQFCDAHTCS GGSKPLSQKP KKRSIVYIIF SIIVLVVLLL YYSFVYLFRR GLKRRSQDLK RIRHNGLKKK PF
101: RSDINEWRCG FCKKAFYEEK YLDKHFDSRH YNLLNASHGK CLSDLCGALH CDLVVDTARL KSKCNPAAAA KNRHLCESLA NSCFPVNKGS SANRLHDFFL
201: RQFCDAHTCS GGSKPLSQKP KKRSIVYIIF SIIVLVVLLL YYSFVYLFRR GLKRRSQDLK RIRHNGLKKK PF
Arabidopsis Description
At5g40710 [Source:UniProtKB/TrEMBL;Acc:Q9FM27]
SUBAcon: [plasma membrane,vacuole,extracellular]
SUBAcon: [plasma membrane,vacuole,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.