Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- vacuole 3
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G048500.1 | Wheat | golgi | 93.66 | 92.75 |
| TraesCS7A01G053200.1 | Wheat | vacuole | 86.34 | 86.34 |
| TraesCS7A01G053300.1 | Wheat | vacuole | 40.98 | 49.12 |
| HORVU7Hr1G009700.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 38.54 | 48.17 |
| TraesCS4A01G438800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 37.07 | 45.24 |
| TraesCS7A01G465400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.34 | 42.79 |
| TraesCS6A01G092600.1 | Wheat | mitochondrion | 46.83 | 34.29 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G438900.1 | EnsemblPlantsGene:TraesCS4A01G438900 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4A:-:708595385..708596078
Molecular Weight (calculated)
21625.7 Da
IEP (calculated)
4.550
GRAVY (calculated)
0.814
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLEEELSKL AADVAAILPA PVRKAVDALA RSSPARAAAD ALVYLSVGTT CTMFAAAFLT AFAGLACARG WGCTPAYVLS EIVDYLSTPV LLLLPPALVL
101: FFLRAAGCRT KVAADAESLI VKNDEELTLL SPSPLALAIL WLFIGSASMG TISFILFKCG STEISDLLGY AALLCTFMWE ALVYVRAAVA LWRMNPGPSN
201: MVAAE
101: FFLRAAGCRT KVAADAESLI VKNDEELTLL SPSPLALAIL WLFIGSASMG TISFILFKCG STEISDLLGY AALLCTFMWE ALVYVRAAVA LWRMNPGPSN
201: MVAAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.