Factsheet for TraesCS4A01G471400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 24958017

msms PMID: 24958017 doi

DE Kim, SK Roy, AH Kamal, K Cho, SJ Kwon, SW Cho, CS Park, JS Choi, S Komatsu, MS Lee, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G092400.1	Wheat	cytosol	88.3	74.9
TraesCS7B01G024800.1	Wheat	cytosol, plastid	69.04	74.88
TraesCS7A01G125700.1	Wheat	endoplasmic reticulum, extracellular	76.15	55.61
Os08t0542200-01	Rice	cytosol	55.05	49.38
TraesCS4A01G497100.1	Wheat	cytosol, extracellular, golgi, plastid	39.91	49.01
TraesCS4A01G470800.1	Wheat	cytosol	80.96	45.78
TraesCS7A01G021200.1	Wheat	cytosol	76.61	45.26
TraesCS1A01G038600.1	Wheat	cytosol	27.98	38.61
TraesCS3A01G519900.1	Wheat	cytosol	30.5	36.94
TraesCS7A01G021400.1	Wheat	golgi, mitochondrion, nucleus, plastid	77.29	34.04
TraesCS4A01G471700.1	Wheat	cytosol	46.33	30.42
TraesCS7A01G021100.1	Wheat	cytosol	77.06	28.84
TraesCS7A01G007700.1	Wheat	cytosol, plasma membrane	77.29	28.39
TraesCS4A01G471300.1	Wheat	cytosol	75.46	26.7
TraesCS4A01G471200.1	Wheat	cytosol	77.06	26.17
Os08t0543500-01	Rice	cytosol, plastid	64.22	24.28
EES14172	Sorghum	cytosol	61.93	22.67
OQU80806	Sorghum	cytosol	60.09	22.66
TraesCS5A01G024600.1	Wheat	cytosol, extracellular, plasma membrane	61.01	22.39
TraesCS4A01G496700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	49.08	22.34
TraesCS4A01G496800.1	Wheat	extracellular, nucleus, plasma membrane, plastid	47.71	21.96
OQU80781	Sorghum	cytosol, extracellular, nucleus	59.17	21.7
Os08t0543050-00	Rice	cytosol, plastid	60.09	21.65
TraesCS4A01G472000.1	Wheat	cytosol	45.64	21.35
TraesCS7A01G001100.1	Wheat	mitochondrion	47.02	20.9
EES14143	Sorghum	cytosol	55.28	20.62
Zm00001d031711_P001	Maize	cytosol	52.75	19.25
TraesCS7A01G001000.1	Wheat	endoplasmic reticulum, extracellular	49.08	17.69
TraesCS7A01G535400.1	Wheat	plasma membrane	37.16	17.69
TraesCS7A01G002300.1	Wheat	peroxisome	47.94	17.29
TraesCS1A01G009300.2	Wheat	cytosol, plasma membrane	37.61	13.04
TraesCS3A01G519800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.39	12.82
TraesCS7A01G535500.1	Wheat	cytosol	34.63	12.82
TraesCS7A01G534600.1	Wheat	endoplasmic reticulum, vacuole	37.61	12.63
TraesCS1A01G010400.1	Wheat	cytosol	39.45	12.16
TraesCS1A01G009400.1	Wheat	cytosol	37.39	11.99
TraesCS1A01G008100.1	Wheat	cytosol	37.16	11.46
TraesCS1A01G008300.1	Wheat	cytosol	39.68	11.46
TraesCS1A01G009600.1	Wheat	cytosol	23.62	9.04
TraesCS1A01G038700.1	Wheat	cytosol, plastid	9.17	4.55
TraesCS7A01G534900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	0.23	0.15
TraesCS7A01G125800.1	Wheat	cytosol, mitochondrion	0.0	0.0
TraesCS7A01G535300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G471400.1	EnsemblPlantsGene:TraesCS4A01G471400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR23155	PANTHER:PTHR23155:SF613
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr4A:-:731850021..731851331

Molecular Weight (calculated)

49355.4 Da

IEP (calculated)

9.526

GRAVY (calculated)

-0.262

Length

436 amino acids

Sequence
(BLAST)

001: MAESPLLPLV RDVASKAADA VVGMVTRVCG LDDDRGTLER QLLPVECKLA NAKERSMTNG YVKSWMKELK SVAYKADDVL DDFQYEALRR QSKIGRSTSH
101: KVLGYITRRN PLLFRFEMSR KLKNVLEKVN KLVEEMNKFG LEKSVHKEER RHPWQQTHSK LDDSTIIFGR DDDKKVVVKL LLNQQDQRKV QVLPIFGMGG
201: LGKTTLAKMV YNSQEVKQHF QLKMWHCVSD NFDAIALLKS IIELATNGSC DLHGSIELLQ KRLEQVIGQK RFILVLDDVW NEDKIMWEDV LKPLLCSVGG
301: SGSVIVVTCR SKQVASIMCT IKPHKLVFLS ANDSWELFSN KTFSNGVKEP AELVSIGRRI VNKCGGLPLA LKTMGGLLSS KKHVHEWKGI EASSIRDNDG
401: GKYEVMPILK LSYKHLSSEM KQCFALCAIF PKDYEL

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.