Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| EnsemblPlants:TraesCS4B01G029700.1 | EnsemblPlantsGene:TraesCS4B01G029700 | Gene3D:2.60.40.10 | InterPro:AMPK1_CBM | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | ncoils:Coil | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF47 | PFAM:PF16561 | SEG:seg |
| SUPFAM:SSF81296 | TIGR:cd02859 | MapMan:3.2.1.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:21934891..21944001
Molecular Weight (calculated)
49615.5 Da
IEP (calculated)
5.437
GRAVY (calculated)
-0.867
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPRQPYRR PAPAPAPAPR PSNAPAPAPP QRGPRDQEEL EAAIYDFMRR SDKPGAFPTR AELLAAGRAD LAAAVESSGG WLSLGWSWSS DDDARRPAAS
101: TAGPGVHPDY PPEAGASGRA PNATADSVRE QQEPTPSGRQ PETEETQEAG SGAGLEGMLT RLRRERERAR PPPRSKNRAG GQGQNGALMN HNGAPSRSPT
201: DGMYTRRIPV NGNIHRSHSQ NGIPEDNKSS SSANDAWRTW SLDKSRFSDF EAAEIHPLSR KPPKRADLDT VLIEDDVPGP SNDSLKTLRS RFDGVSSYMS
301: NGEEADVVNG FSDDWEFEET KVMHAQEELR TIRAKIAVLE GKVALEIIDK NKIIEEKQTR LDEVEKALSE LRTVSVVWPN PASEVLLTGS FDGWTSQRRM
401: EQSEGGIFSY NLRLYPGRYE IKFIVDGVWK NDPLRPTVNN NGNENNLMIV T
101: TAGPGVHPDY PPEAGASGRA PNATADSVRE QQEPTPSGRQ PETEETQEAG SGAGLEGMLT RLRRERERAR PPPRSKNRAG GQGQNGALMN HNGAPSRSPT
201: DGMYTRRIPV NGNIHRSHSQ NGIPEDNKSS SSANDAWRTW SLDKSRFSDF EAAEIHPLSR KPPKRADLDT VLIEDDVPGP SNDSLKTLRS RFDGVSSYMS
301: NGEEADVVNG FSDDWEFEET KVMHAQEELR TIRAKIAVLE GKVALEIIDK NKIIEEKQTR LDEVEKALSE LRTVSVVWPN PASEVLLTGS FDGWTSQRRM
401: EQSEGGIFSY NLRLYPGRYE IKFIVDGVWK NDPLRPTVNN NGNENNLMIV T
001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
Arabidopsis Description
PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.