Factsheet for TraesCS5A01G140500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G165100.1
TraesCS2B01G191300.1
TraesCS2D01G172200.1
TraesCS4A01G160900.1
TraesCS4B01G160100.1
TraesCS4D01G156000.1
TraesCS5A01G245400.1
TraesCS5B01G242900.1
TraesCS5D01G252200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	TraesCS2A01G165100.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS2B01G191300.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS2D01G172200.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4A01G160900.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4B01G160100.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS4D01G156000.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5A01G245400.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5B01G242900.1	AT5G09540.1	21798944
AT1G73100.1	TraesCS5D01G252200.1	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G152000.1	Wheat	nucleus	95.6	94.77
TraesCS5B01G138800.1	Wheat	nucleus	95.6	91.83
HORVU5Hr1G045170.2	Barley	nucleus, plastid	75.51	85.69
Os12t0128450-00	Rice	nucleus	62.76	69.71
Os11t0131600-00	Rice	nucleus	66.13	67.92
OQU78645	Sorghum	nucleus	65.98	60.32
Zm00001d041005_P001	Maize	nucleus	57.62	56.22
CDY04931	Canola	cytosol, extracellular, nucleus	5.87	52.63
TraesCS1A01G308300.1	Wheat	nucleus	50.73	51.34
TraesCS1A01G362000.1	Wheat	nucleus	50.59	51.04
Bra009408.1-P	Field mustard	nucleus	35.78	47.66
GSMUA_Achr5P27620_001	Banana	nucleus	41.35	45.63
KRH56252	Soybean	nucleus	13.93	44.6
TraesCS3A01G336100.1	Wheat	nucleus	47.8	43.76
CDX80930	Canola	nucleus	40.62	43.01
Bra028776.1-P	Field mustard	nucleus	40.03	42.99
CDY11319	Canola	nucleus	40.47	42.79
Bra005829.1-P	Field mustard	nucleus	40.32	42.64
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	19.5	42.63
KRH62706	Soybean	nucleus	39.88	40.78
Bra009409.1-P	Field mustard	nucleus	39.74	40.75
Solyc09g082050.2.1	Tomato	nucleus	38.42	40.49
CDX96449	Canola	nucleus	38.71	40.18
CDX68245	Canola	nucleus	39.15	40.09
AT1G73100.1	Thale cress	nucleus	39.3	40.06
CDX98805	Canola	nucleus	38.42	40.0
CDY59935	Canola	nucleus	38.56	39.91
AT5G04940.2	Thale cress	nucleus	39.15	39.85
CDY11129	Canola	nucleus	39.0	39.76
CDY61331	Canola	nucleus	38.86	39.61
VIT_13s0047g00120.t01	Wine grape	nucleus	41.5	39.53
Bra016018.1-P	Field mustard	nucleus	39.15	39.44
PGSC0003DMT400077329	Potato	nucleus	38.71	39.34
TraesCS3A01G385200.1	Wheat	plastid	41.79	39.26
KRH20576	Soybean	nucleus	38.42	38.93
CDX98804	Canola	nucleus	34.6	38.5
KRH13229	Soybean	nucleus	37.98	38.48
KRH66648	Soybean	nucleus	39.59	38.14
Solyc10g077070.1.1	Tomato	nucleus	39.59	37.82
CDY14135	Canola	nucleus	39.88	37.67
TraesCS4A01G023500.1	Wheat	nucleus	45.89	37.53
PGSC0003DMT400018512	Potato	nucleus	39.44	37.47
VIT_08s0040g00360.t01	Wine grape	nucleus	40.32	37.31
TraesCS3A01G520700.1	Wheat	nucleus	14.66	34.72
AT1G17770.1	Thale cress	nucleus	35.04	34.49
KRG95012	Soybean	plastid	24.34	34.02
CDY26218	Canola	nucleus	32.7	31.95
CDY66122	Canola	nucleus	33.28	31.79
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	24.49	31.45
TraesCS2A01G235400.1	Wheat	nucleus	30.79	31.34
TraesCS1A01G042900.1	Wheat	nucleus	28.59	30.19
AT2G24740.1	Thale cress	nucleus	32.99	29.8
TraesCS3A01G457900.1	Wheat	plastid	22.87	28.84
CDY56214	Canola	nucleus	33.43	28.75
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	13.78	28.31
TraesCS3A01G441200.1	Wheat	nucleus	27.27	26.96
CDX70182	Canola	nucleus	39.59	26.68
TraesCS4A01G100900.1	Wheat	nucleus	25.66	26.04
Bra025949.1-P	Field mustard	nucleus	32.4	24.75
Bra004258.1-P	Field mustard	nucleus	33.14	24.59
CDY26221	Canola	nucleus	32.26	24.58
TraesCS1A01G241600.2	Wheat	nucleus	26.83	22.34
TraesCS1A01G117300.1	Wheat	nucleus	28.59	20.59
TraesCS5A01G194500.1	Wheat	plastid	29.62	17.43
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	25.66	17.36
TraesCS2A01G478800.1	Wheat	nucleus	14.81	16.83
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	17.45	15.97
TraesCS2A01G382000.5	Wheat	nucleus	15.84	15.95
TraesCS6A01G226600.1	Wheat	nucleus	15.69	15.71
TraesCS5A01G197900.1	Wheat	nucleus	19.5	13.41
CDY01852	Canola	plasma membrane	34.16	12.55
TraesCS6A01G274600.1	Wheat	nucleus	17.16	7.17
CDX86631	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF369	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS5A01G140500	EnsemblPlants:TraesCS5A01G140500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:312751552..312753600

Molecular Weight (calculated)

74885.8 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.523

Length

682 amino acids

Sequence
(BLAST)

001: MGSLIGEAET AEQPLDPKPL HSLAPMFPTP PGYDVAISDP PFFYITPIQQ HPGPAAASFA GPPPQQHPGP APASFAGPSP GPGSAVPLKA TPISAAFPAR
101: RLKEETSDED YTPASEKRKP SSSSPKRTAK RVRQAGDSTA ANTKQRPIRR SLSKELAGWP STSDNPREAV EATMAMFDSL RRRTLQLDEK EGLGRRADLK
201: ASVLMNHNNL KINTLKTIGP VPGVEIGDIF FYRIEMCIVG LHAPSMAGID YLSAKLAGRD ESLAVSIISS GGYENVEDET DTLVYTGQGG NSRRKEKHDQ
301: KLEKGNLALS NSASKKNPIR VVRSARDPFS ITAGKVYIYD GVYRVEDSWM DTAKNGFSVF KYRLRREPGQ PDGFSAWKMT DRWKANRATR ENAIVLDLSS
401: GAEILPVCLV NEVDGEGGPS HFKYVTGVKH SRPLGRNRPL HHCECTSVCM PGDPNCSCAR QNGGDLPYDL DGVLARHVPL LYECSRDCHC TKNCRNRVAQ
501: KGVQLNFEVF RTGERGWGLR SWDPIRAGAF VCEYAGQVMD ETNMSMDVQE DEYTFRTTCP SDKALRWNLG AELLEEKGAD DATAERFKKL PVVISAKDAG
601: NVARFINHSC SPNLLWQAVQ YDHTDDSYPH IMFFAMKHIP PMTELTYDYG IRGAPPGLKG KSPLACKLRP CFCGSANCRG SF

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.