Factsheet for TraesCS5A01G194500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G190000.1	Wheat	plastid	90.16	91.59
TraesCS5D01G197700.2	Wheat	plastid	89.21	91.18
HORVU5Hr1G057440.1	Barley	plastid	83.87	83.58
OQU80399	Sorghum	nucleus	30.72	62.46
Os09t0362900-01	Rice	mitochondrion, nucleus	44.87	56.46
TraesCS3A01G520700.1	Wheat	nucleus	12.68	51.04
EER96634	Sorghum	nucleus	53.32	49.6
Zm00001d005650_P001	Maize	plastid	52.37	46.66
TraesCS1A01G117300.1	Wheat	nucleus	33.05	40.44
TraesCS5A01G197900.1	Wheat	nucleus	30.63	35.79
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	13.98	30.51
TraesCS1A01G362000.1	Wheat	nucleus	17.43	29.88
TraesCS1A01G308300.1	Wheat	nucleus	17.26	29.67
TraesCS5A01G140500.1	Wheat	nucleus	17.43	29.62
TraesCS2A01G235400.1	Wheat	nucleus	17.0	29.4
TraesCS3A01G441200.1	Wheat	nucleus	16.91	28.41
TraesCS3A01G457900.1	Wheat	plastid	13.11	28.1
TraesCS3A01G336100.1	Wheat	nucleus	17.86	27.79
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	23.99	27.58
TraesCS3A01G385200.1	Wheat	plastid	16.74	26.72
TraesCS1A01G042900.1	Wheat	nucleus	14.84	26.63
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	7.51	26.2
TraesCS1A01G241600.2	Wheat	nucleus	17.6	24.91
TraesCS4A01G023500.1	Wheat	nucleus	17.6	24.46
TraesCS4A01G100900.1	Wheat	nucleus	14.15	24.4
TraesCS2A01G478800.1	Wheat	nucleus	8.28	16.0
TraesCS2A01G382000.5	Wheat	nucleus	8.89	15.21
TraesCS6A01G226600.1	Wheat	nucleus	8.89	15.12
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	9.32	14.5
TraesCS6A01G274600.1	Wheat	nucleus	11.48	8.15

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5A01G194500	EnsemblPlants:TraesCS5A01G194500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:398189267..398193504

Molecular Weight (calculated)

125430.0 Da

IEP (calculated)

6.891

GRAVY (calculated)

-0.476

Length

1159 amino acids

Sequence
(BLAST)

0001: MPRLLLGACV LMVGVEPPAP PSRTPIGARL AARGVRPRRV SAKRSWPPGC GRFRAAPPAP EAGDGERGAT NGVIEVIVEE AASHESVSSA AAPPQLDTEG
0101: LAEGTKKVGD AIDAVVVSSA ACNGDLPHAP PQLETMPEER KEGSETHMDR AGVSSVACNG DLPHALPQPE TEGMVELRKE GGEAQPSSGG NARGQAESSA
0201: IEVMPLAFAA PKSFTVAAVN GSVENGGDGA ESLLMEGNRG LGSGRLVREE DVAGNGNGSV MENRTGNGEL ERKEDGHDTA RKKRWLMSAV NPPPKRRAIS
0301: AVRTFPPGCG RDAVTGTGSR VEEESVLEAT PISFATRGAS VVDALTTVPG SGHGASPVVV RDASNEVQGK RAEVVGAGDG EVRGKFDGSL RKGTTNKTYV
0401: RSRVVDAKTK GKRPKDVTMN DTLRDDVGVS GDGTPENKNS IDDVRSNSNT KHGIVKLKSY GIGKDSLIRS SKESKCGNHD MTNQSEETDD LTLISDKLIV
0501: QALMAPDKCP WTKGRKSSAS ASNSRTPRNK SLPPKKPKKK DATPRKVLPP KVTASTSAVH EKIDHGEYSC LEDDGNPIAL AVPERKELCV TLPPCAPFGD
0601: QSVDARSKVR KLLKLFQLIC RKLMQAEEQQ LRNFGRIDLE AIEVLKKYDG YSKPDAIVGD VPGVVVGDEF HFRVELSIVG LHRIYQGGID SAIVDGTRIA
0701: ISIVASGGYP DELSSSDELI YTGSGGKATG KKDAEDQKLK GGNLALKNCI KTKTPVRVIH GFKGQSRSEV GQSKSKQIST YTYDGLYVVV DCWQEGASGS
0801: MVFKYKLKRI LGQPELALHI VKETRMSKVR KGLRCPDISL EKERIPICVI NTIDDAQPTP FEYITKVIYP PSYAKEPPQG CDCTDGCSDS SRCACAVKNG
0901: GEIPFNFNGA IVHAKPLIYE CGPSCRCPPT CHNRASQHGI KIPLEIFKTG ETGWGVRSLS SISSGSFICE YAGELLQDTE AEKRENDEYL FDIGHNYDDE
1001: ELWKGLPSMI PGLESSTSET MEESVGFTID AAKCGNVGRF INHSCSPNLY AQNVLWDHDD KRMPHIMFFA AENIPPLQEL TYHYNYTIGQ VRDKNGVEKL
1101: NYYLLLHFEE HISSNSSPFL GVWEALKEWY EVSRIKHFGV AHSPVEIFTW TWRIRICND

Best Arabidopsis Sequence Match ( AT2G22740.1 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.