Factsheet for TraesCS5A01G245400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol, nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	87.12	87.29
TraesCS5B01G242900.1	Wheat	cytosol	85.23	85.39
HORVU5Hr1G069570.1	Barley	nucleus	78.41	75.82
Os09t0463700-01	Rice	nucleus	40.72	57.8
KXG35797	Sorghum	nucleus	38.64	53.12
Zm00001d020762_P001	Maize	nucleus	39.77	47.73
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	26.7	47.64
GSMUA_Achr3P06790_001	Banana	cytosol	19.13	31.08
GSMUA_Achr10P...	Banana	cytosol	21.97	27.55
AT5G09540.1	Thale cress	nucleus	14.58	27.5
CDY21586	Canola	cytosol	14.96	27.34
CDY69792	Canola	cytosol	14.96	26.96
TraesCS2A01G165100.1	Wheat	cytosol	19.89	26.85
Bra009389.1-P	Field mustard	cytosol	14.77	26.62
TraesCS4A01G160900.1	Wheat	cytosol	19.51	25.75
GSMUA_Achr1P21390_001	Banana	cytosol	18.94	24.81
CDY31322	Canola	cytosol	16.48	23.32
Bra031921.1-P	Field mustard	cytosol	16.29	23.31
Solyc07g007230.2.1	Tomato	nucleus	16.86	20.89
AT5G64360.7	Thale cress	nucleus	18.18	20.69
VIT_03s0017g00300.t01	Wine grape	nucleus	18.75	20.37
TraesCS1A01G141000.1	Wheat	plastid	7.77	20.2
KRH42098	Soybean	nucleus	17.05	19.78
KRH10601	Soybean	nucleus	18.37	19.52
KRH49811	Soybean	nucleus	17.05	19.11
CDX84519	Canola	nucleus	16.67	18.53
Bra024289.1-P	Field mustard	nucleus	16.1	18.52
KRH21766	Soybean	nucleus	17.23	18.24
PGSC0003DMT400079004	Potato	cytosol	17.05	17.61
CDY58269	Canola	nucleus	16.1	16.93
CDY45966	Canola	nucleus	22.92	16.26
Bra027007.1-P	Field mustard	nucleus	22.73	16.09
CDY46799	Canola	nucleus	11.55	15.56
CDY45473	Canola	nucleus	21.97	15.51
Solyc11g006170.1.1	Tomato	nucleus	18.94	15.41
PGSC0003DMT400073845	Potato	cytosol	18.94	15.34
Solyc11g006140.1.1	Tomato	nucleus	16.1	14.29
PGSC0003DMT400083794	Potato	nucleus	19.13	13.59
AT1G62970.1	Thale cress	nucleus	20.45	13.55
Solyc01g105780.2.1	Tomato	nucleus	17.61	12.97

Protein Annotations

EnsemblPlants:TraesCS5A01G245400.1	EnsemblPlantsGene:TraesCS5A01G245400	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45496	SEG:seg
SUPFAM:SSF46565	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:458908876..458910462

Molecular Weight (calculated)

55924.0 Da

IEP (calculated)

10.178

GRAVY (calculated)

-0.522

Length

528 amino acids

Sequence
(BLAST)

001: MDPAAAAARR QADKWMSVAE KLLMAKDLEG CKEFSSQAIA ADPRTPGAED LYAAADVLLA SQRRRLPSGQ PDPYAVLGLD SAKPASRLPD VVHSKFRRLS
101: LLLNRSHPDR PCSVYVAEAA RLVADAWAFL SNAGLKSALD AELHAAAAPR ASHPPAPLQQ PAVERRPQPS PPPQQSPGWA APQPRPPPQR IPVRPAPQPT
201: PPPQPSSLRA ATQTPPPPQP SSLRAATQTP PPPQPSPLQA ATQPQPSPQP SRLQAATRPP PSPSQAATKP PPSPQPSPLQ PATQPPPPPQ PSPLQAASQP
301: PARAATPPVE SGTLPPSTFW TLCKGCSHIH QYDRLYEARK LKCSSCHQPF LAEAMAEPPP IVPGTDMYYC TWGFFPIGFP GCPGYADLVN SQPQGSGQLN
401: VPWLGANGRV AAENGTPITI GAAREGPVAS EPSPEPLMRT GVEVPLVPEP APEPLMRMRV GVPAVPEPVM PTRVEAPAAP EPVMPTRVEV PAAPEPVQPT
501: RVKSVKVGAK KRGRPKGSKN KKSLRVVT

Best Arabidopsis Sequence Match ( AT2G01710.1 )
(BLAST)

001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.