Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| EnsemblPlants:TraesCS5A01G265900.1 | EnsemblPlantsGene:TraesCS5A01G265900 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF59 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr5A:-:477584523..477587375
Molecular Weight (calculated)
43049.7 Da
IEP (calculated)
8.661
GRAVY (calculated)
-0.773
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: METGGSGGGG DGGGRRPGDD LHGLNFGQKI YFEQDVAGSS SSGGRRGKGP APARAGGGGG GPGASTPAAA GSASQQQQQQ PRCQVEGCGV DLSGGKTYYC
101: RHKVCLEHSK APLVVVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG PMSTRYGRLA ASFNDPGRLR SFLLDFTYPR APAGVRDPWP
201: AVQAGEHRMP GTTHWQGGHH EHHPHRSAVA GYGDHHAYNG QGSSSGGGGA PPPMIPGGFE LPSDECMAGV AADSSCALSL LSTQPWDSSA HSSSHNRSPA
301: MSTTSAFQGS PVAPSVMASN YMAASSSGSW GSPRGGRSMH HHQQQQQQHH MQHDTVMSEV HPSSVHHGQF GELELALQQG RAAPNPPHAE HGSGPGGAFS
401: HSSNAMNWSL
101: RHKVCLEHSK APLVVVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG PMSTRYGRLA ASFNDPGRLR SFLLDFTYPR APAGVRDPWP
201: AVQAGEHRMP GTTHWQGGHH EHHPHRSAVA GYGDHHAYNG QGSSSGGGGA PPPMIPGGFE LPSDECMAGV AADSSCALSL LSTQPWDSSA HSSSHNRSPA
301: MSTTSAFQGS PVAPSVMASN YMAASSSGSW GSPRGGRSMH HHQQQQQQHH MQHDTVMSEV HPSSVHHGQF GELELALQQG RAAPNPPHAE HGSGPGGAFS
401: HSSNAMNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.