Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G165100.1
TraesCS2B01G191300.1
TraesCS2D01G172200.1
TraesCS4A01G160900.1
TraesCS4B01G160100.1
TraesCS4D01G156000.1
TraesCS5A01G245400.1
TraesCS5B01G242900.1
TraesCS5D01G252200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73100.1 TraesCS2A01G165100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2B01G191300.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2D01G172200.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4A01G160900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4B01G160100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4D01G156000.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5A01G245400.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5B01G242900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5D01G252200.1 AT5G09540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G140500.1 Wheat nucleus 91.83 95.6
TraesCS5D01G152000.1 Wheat nucleus 92.11 95.06
HORVU5Hr1G045170.2 Barley nucleus, plastid 73.52 86.86
Os12t0128450-00 Rice nucleus 61.13 70.68
Os11t0131600-00 Rice nucleus 64.51 68.98
OQU78645 Sorghum nucleus 64.23 61.13
Zm00001d041005_P001 Maize nucleus 55.63 56.51
CDY04931 Canola cytosol, extracellular, nucleus 5.63 52.63
TraesCS1B01G319000.1 Wheat nucleus 49.01 51.63
TraesCS1B01G378900.1 Wheat nucleus 48.73 51.34
Bra009408.1-P Field mustard nucleus 34.37 47.66
KRH56252 Soybean nucleus 13.94 46.48
GSMUA_Achr5P27620_001 Banana nucleus 40.28 46.28
TraesCS3B01G366900.1 Wheat nucleus 46.9 44.82
TraesCS3B01G367200.1 Wheat nucleus 46.9 44.82
Bra028776.1-P Field mustard nucleus 38.45 42.99
AT2G05900.1 Thale cress cytoskeleton, cytosol, nucleus 18.87 42.95
CDX80930 Canola nucleus 38.87 42.86
CDY11319 Canola nucleus 38.59 42.48
Bra005829.1-P Field mustard nucleus 38.45 42.33
TraesCS4B01G280000.1 Wheat nucleus 42.82 41.93
KRH62706 Soybean nucleus 38.87 41.38
CDX96449 Canola nucleus 38.03 41.1
Bra009409.1-P Field mustard nucleus 38.31 40.9
Solyc09g082050.2.1 Tomato nucleus 37.18 40.8
CDY59935 Canola nucleus 37.61 40.52
Bra016018.1-P Field mustard nucleus 38.45 40.33
CDX98805 Canola nucleus 37.04 40.15
CDX68245 Canola nucleus 37.46 39.94
AT1G73100.1 Thale cress nucleus 37.61 39.91
CDY11129 Canola nucleus 37.46 39.76
VIT_13s0047g00120.t01 Wine grape nucleus 40.0 39.66
CDY61331 Canola nucleus 37.32 39.61
AT5G04940.2 Thale cress nucleus 37.32 39.55
PGSC0003DMT400077329 Potato nucleus 37.32 39.49
KRH20576 Soybean nucleus 37.18 39.23
KRH13229 Soybean nucleus 37.04 39.08
CDX98804 Canola nucleus 33.52 38.83
TraesCS3B01G417400.1 Wheat nucleus 45.35 38.66
KRH66648 Soybean nucleus 38.45 38.56
Solyc10g077070.1.1 Tomato nucleus 38.31 38.1
VIT_08s0040g00360.t01 Wine grape nucleus 39.44 37.99
PGSC0003DMT400018512 Potato nucleus 38.03 37.6
CDY14135 Canola nucleus 38.17 37.53
AT1G17770.1 Thale cress nucleus 33.66 34.49
KRG95012 Soybean plastid 23.66 34.43
CDY26218 Canola nucleus 31.69 32.23
CDY66122 Canola nucleus 32.39 32.21
TraesCS2B01G254700.1 Wheat nucleus 29.15 30.76
TraesCS1B01G055800.1 Wheat nucleus 27.18 30.11
AT2G24740.1 Thale cress nucleus 31.83 29.93
CDY56214 Canola nucleus 32.39 29.0
TraesCS3B01G342100.1 Wheat nucleus 12.82 27.41
TraesCS3B01G498100.1 Wheat nucleus 24.08 27.19
CDX70182 Canola nucleus 38.17 26.78
TraesCS3B01G498000.1 Wheat nucleus 23.94 26.44
TraesCS4B01G203900.1 Wheat nucleus 25.07 26.29
TraesCS3B01G475200.1 Wheat nucleus 23.8 25.72
TraesCS3B01G590300.1 Wheat nucleus 22.39 25.32
Bra025949.1-P Field mustard nucleus 31.41 24.97
Bra004258.1-P Field mustard nucleus 32.11 24.81
CDY26221 Canola nucleus 31.27 24.8
TraesCS2B01G409600.1 Wheat nucleus 24.79 18.3
TraesCS5B01G190000.1 Wheat plastid 27.89 17.35
TraesCS2B01G503200.1 Wheat nucleus 14.08 16.64
TraesCS2B01G399300.4 Wheat nucleus 15.21 15.95
TraesCS2B01G501300.2 Wheat mitochondrion, nucleus 16.48 15.81
TraesCS2B01G616200.1 Wheat nucleus 16.06 15.47
TraesCS1B01G137100.1 Wheat nucleus, plastid 28.73 15.36
TraesCS6B01G255000.1 Wheat nucleus 14.65 15.27
TraesCS5B01G185700.3 Wheat nucleus 21.55 13.8
CDY01852 Canola plasma membrane 33.1 12.66
TraesCS6B01G302100.2 Wheat nucleus 16.62 7.27
CDY53193 Canola mitochondrion 0.0 0.0
CDY21127 Canola cytosol 0.0 0.0
CDX89821 Canola cytosol 0.0 0.0
CDX86631 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.7MapMan:12.5.1.16.1Gene3D:2.170.270.10Gene3D:2.30.280.10GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009987
GO:GO:0016043GO:GO:0016571GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plantInterPro:IPR001214InterPro:IPR003105InterPro:IPR003616InterPro:IPR007728InterPro:IPR025794
InterPro:IPR036987PFAM:PF00856PFAM:PF02182PFAM:PF05033PFscan:PS50280PFscan:PS50867
PFscan:PS50868PFscan:PS51015PFscan:PS51575PANTHER:PTHR22884PANTHER:PTHR22884:SF369InterPro:PUA-like_sf
InterPro:Post-SET_domInterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00466SMART:SM00468
InterPro:SRA-YDG_sfInterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697EnsemblPlantsGene:TraesCS5B01G138800EnsemblPlants:TraesCS5B01G138800.1
SEG:seg:::::
Description
No Description!
Coordinates
chr5B:+:262563442..262565574
Molecular Weight (calculated)
77595.0 Da
IEP (calculated)
8.145
GRAVY (calculated)
-0.532
Length
710 amino acids
Sequence
(BLAST)
001: MGSLIDEAGT EEQPLDPKPL HSLAPMFPTP PGYDLATAGS SDPPFFYYIT PIRQHPGPAP ASFAGPPPGP CSSPQQHPGP APASFAGPPP QQHPGPAPAS
101: FAGPSPGPGS AVPLKATPIS AAFPARRLKE ELSDEDYTPA SEKRKPSSSS PKSTAKRVRQ AGDSTAANTK QRPIRRSLSK ELAGWPSASD NPREAVEATM
201: AMFDSLRRRT LQLDEKEGLG RRADLKASVL MNHNNLKINS LKTIGPVPGV EIGDIFFYRI EMCIVGLHAP SMAGIDYLSA KLVAGRDESL AVSIISSGGY
301: ENVEDETDTL VYTGQGGNSR RKDKEKHDQK LEKGNLALSN SASKKNQIRV VRSARDPFSI TAGKVYIYDG VYRIEDSWMD TAKNGFSVFK YRLRREPGQP
401: HGISVWKMTE KWKANRATRE NAMVLDLSSG AEILPVCLVN EVDGETGPSH FKYVTGVKHS RPLGRNKPLH HCECTSVCMP GDPNCSCARQ NGGDLPYNLD
501: GVLARHVPML YECSRDCHCT KDCRNRVAQR GVQLNFEVFR TGDRGWGLRS WDPIRAGAFV CEYAGQVMDE TNMSMDVEED EYTFRTTCPS DKALRWNLGA
601: ELLEEKGADA TAERFKKLPV VISAKDAGNV ARFVNHSCSP NLLWQAVQYD HTDDSYPHIM FFAMKHIPPM TELTYDYGIR GAPPGLKGKS PLACKLKPCL
701: CGSANCRGSF
Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)
001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
Arabidopsis Description
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.