Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 94.69 | 94.69 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 85.39 | 85.23 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 82.16 | 79.3 |
| Os09t0463700-01 | Rice | nucleus | 40.42 | 57.26 |
| KXG35797 | Sorghum | nucleus | 38.9 | 53.39 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 26.76 | 47.64 |
| Zm00001d020762_P001 | Maize | nucleus | 39.28 | 47.05 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 19.17 | 31.08 |
| GSMUA_Achr10P... | Banana | cytosol | 22.96 | 28.74 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 21.06 | 27.68 |
| AT5G09540.1 | Thale cress | nucleus | 14.42 | 27.14 |
| CDY21586 | Canola | cytosol | 14.8 | 26.99 |
| CDY69792 | Canola | cytosol | 14.8 | 26.62 |
| TraesCS2B01G191300.1 | Wheat | cytosol | 19.73 | 26.53 |
| Bra009389.1-P | Field mustard | cytosol | 14.61 | 26.28 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 19.17 | 25.06 |
| Bra031921.1-P | Field mustard | cytosol | 16.51 | 23.58 |
| CDY31322 | Canola | cytosol | 16.51 | 23.32 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 19.73 | 21.4 |
| AT5G64360.7 | Thale cress | nucleus | 18.6 | 21.12 |
| KRH42098 | Soybean | nucleus | 18.22 | 21.1 |
| Solyc07g007230.2.1 | Tomato | nucleus | 16.89 | 20.89 |
| KRH49811 | Soybean | nucleus | 18.41 | 20.59 |
| KRH10601 | Soybean | nucleus | 19.17 | 20.32 |
| CDX84519 | Canola | nucleus | 17.27 | 19.16 |
| Bra024289.1-P | Field mustard | nucleus | 16.51 | 18.95 |
| KRH21766 | Soybean | nucleus | 17.65 | 18.64 |
| PGSC0003DMT400079004 | Potato | cytosol | 17.27 | 17.81 |
| CDY58269 | Canola | nucleus | 16.51 | 17.33 |
| CDY45966 | Canola | nucleus | 22.39 | 15.86 |
| CDY46799 | Canola | nucleus | 11.76 | 15.82 |
| Bra027007.1-P | Field mustard | nucleus | 22.2 | 15.68 |
| CDY45473 | Canola | nucleus | 22.01 | 15.51 |
| Solyc11g006170.1.1 | Tomato | nucleus | 18.79 | 15.25 |
| PGSC0003DMT400073845 | Potato | cytosol | 18.79 | 15.18 |
| Solyc11g006140.1.1 | Tomato | nucleus | 16.51 | 14.62 |
| PGSC0003DMT400083794 | Potato | nucleus | 20.3 | 14.4 |
| AT1G62970.1 | Thale cress | nucleus | 20.3 | 13.43 |
| Solyc01g105780.2.1 | Tomato | nucleus | 18.03 | 13.25 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G242900.1 | EnsemblPlantsGene:TraesCS5B01G242900 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PANTHER:PTHR45496 | SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:+:422938674..422940719
Molecular Weight (calculated)
56125.5 Da
IEP (calculated)
10.079
GRAVY (calculated)
-0.494
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAAAAARR QADKWMSVAE KLLMAKDLEG CKEFSSQAIA ADPRTPGAED LYAAADVLLA SQRRRLPNGK PDPYAVLGLD PAMPASRLPD VVHSKFRRLS
101: LLLNRSHPDR PCSVYVAEAA RLVADAWAFL SNAGLKSALD AELDAAAAPR PPMQQPAVER RPHPSPPPQQ SPVWAAPQPR PHPQRIPVRP APQPTPPLQP
201: SSLRAATQTP PPPQSSSLRA ATQTPPPPQP SSLRAATQXQ PSPQPSPLQA ATKPPPSPQP SPLQAATKPP PSPQPSPLQP ATQPPPPPQP SPLQAASQPP
301: ARAATPPVES GTLPASTFWT LCKGCSHIHQ YDRLYEARKL KCSSCHQPFV AEAMAEPPPI VPGTDMYYCT WGFFPIGFPG CPGYVDLVNS QPQGSGQLNV
401: PWLGANGRVA AENGTPITIG AAREEPVASE PSPEPLMRTR VEVPLVLEPA PEPLMRMRVG VPAMPEPVMP TRVEVPAAPE PVMPTRVEVP AAPEPVQPTR
501: VKSVKVGAKK RGRPKGSKNK KNLRVVT
101: LLLNRSHPDR PCSVYVAEAA RLVADAWAFL SNAGLKSALD AELDAAAAPR PPMQQPAVER RPHPSPPPQQ SPVWAAPQPR PHPQRIPVRP APQPTPPLQP
201: SSLRAATQTP PPPQSSSLRA ATQTPPPPQP SSLRAATQXQ PSPQPSPLQA ATKPPPSPQP SPLQAATKPP PSPQPSPLQP ATQPPPPPQP SPLQAASQPP
301: ARAATPPVES GTLPASTFWT LCKGCSHIHQ YDRLYEARKL KCSSCHQPFV AEAMAEPPPI VPGTDMYYCT WGFFPIGFPG CPGYVDLVNS QPQGSGQLNV
401: PWLGANGRVA AENGTPITIG AAREEPVASE PSPEPLMRTR VEVPLVLEPA PEPLMRMRVG VPAMPEPVMP TRVEVPAAPE PVMPTRVEVP AAPEPVQPTR
501: VKSVKVGAKK RGRPKGSKNK KNLRVVT
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.