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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G165100.1
TraesCS2B01G191300.1
TraesCS2D01G172200.1
TraesCS4A01G160900.1
TraesCS4B01G160100.1
TraesCS4D01G156000.1
TraesCS5A01G245400.1
TraesCS5B01G242900.1
TraesCS5D01G252200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73100.1 TraesCS2A01G165100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2B01G191300.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS2D01G172200.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4A01G160900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4B01G160100.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS4D01G156000.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5A01G245400.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5B01G242900.1 AT5G09540.1 21798944
AT1G73100.1 TraesCS5D01G252200.1 AT5G09540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G140500.1 Wheat nucleus 94.77 95.6
TraesCS5B01G138800.1 Wheat nucleus 95.06 92.11
HORVU5Hr1G045170.2 Barley nucleus, plastid 74.56 85.36
Os12t0128450-00 Rice nucleus 61.63 69.06
Os11t0131600-00 Rice nucleus 65.12 67.47
OQU78645 Sorghum nucleus 64.97 59.92
Zm00001d041005_P001 Maize nucleus 56.69 55.79
CDY04931 Canola cytosol, extracellular, nucleus 5.67 51.32
TraesCS1D01G307700.1 Wheat nucleus 50.15 51.19
TraesCS1D01G366800.1 Wheat nucleus 49.13 50.0
Bra009408.1-P Field mustard nucleus 35.61 47.85
KRH56252 Soybean nucleus 14.39 46.48
GSMUA_Achr5P27620_001 Banana nucleus 41.13 45.79
TraesCS3D01G329100.1 Wheat nucleus 46.8 43.34
CDX80930 Canola nucleus 39.97 42.7
Bra028776.1-P Field mustard nucleus 39.39 42.68
AT2G05900.1 Thale cress cytoskeleton, cytosol, nucleus 19.33 42.63
CDY11319 Canola nucleus 39.83 42.48
Bra005829.1-P Field mustard nucleus 39.68 42.33
KRH62706 Soybean nucleus 39.97 41.23
Bra009409.1-P Field mustard nucleus 39.53 40.9
Solyc09g082050.2.1 Tomato nucleus 38.23 40.65
AT1G73100.1 Thale cress nucleus 39.39 40.51
CDX96449 Canola nucleus 38.66 40.49
CDX68245 Canola nucleus 39.1 40.39
CDY59935 Canola nucleus 38.66 40.36
CDX98805 Canola nucleus 38.23 40.15
CDY11129 Canola nucleus 38.95 40.06
AT5G04940.2 Thale cress nucleus 38.95 40.0
CDY61331 Canola nucleus 38.81 39.91
Bra016018.1-P Field mustard nucleus 39.1 39.73
VIT_13s0047g00120.t01 Wine grape nucleus 41.28 39.66
PGSC0003DMT400077329 Potato nucleus 38.52 39.49
KRH20576 Soybean nucleus 38.37 39.23
KRH13229 Soybean nucleus 38.23 39.08
CDX98804 Canola nucleus 34.59 38.83
KRH66648 Soybean nucleus 39.53 38.42
TraesCS4D01G278500.1 Wheat nucleus 45.2 37.97
Solyc10g077070.1.1 Tomato nucleus 38.95 37.53
VIT_08s0040g00360.t01 Wine grape nucleus 40.12 37.45
CDY14135 Canola nucleus 39.24 37.4
PGSC0003DMT400018512 Potato nucleus 38.81 37.19
TraesCS3D01G378200.1 Wheat plastid 35.61 35.77
KRG95012 Soybean plastid 24.42 34.43
AT1G17770.1 Thale cress nucleus 34.3 34.05
CDY26218 Canola nucleus 32.56 32.09
CDY66122 Canola nucleus 33.14 31.93
TraesCS2D01G240000.1 Wheat nucleus 30.09 30.67
TraesCS1D01G043400.1 Wheat nucleus 28.49 30.62
AT2G24740.1 Thale cress nucleus 32.41 29.54
CDY56214 Canola nucleus 33.14 28.75
TraesCS3D01G307900.1 Wheat nucleus 13.52 28.01
CDX70182 Canola nucleus 39.53 26.88
TraesCS3D01G433900.1 Wheat nucleus 26.74 26.67
TraesCS4D01G204500.1 Wheat nucleus 26.02 26.36
TraesCS3D01G450600.1 Wheat nucleus 25.73 26.07
Bra025949.1-P Field mustard nucleus 32.27 24.86
CDY26221 Canola nucleus 32.12 24.69
Bra004258.1-P Field mustard nucleus 32.85 24.59
TraesCS3D01G450700.1 Wheat nucleus 24.71 24.32
TraesCS1D01G241500.1 Wheat nucleus 26.31 22.1
TraesCS2D01G389100.1 Wheat nucleus 25.29 18.12
TraesCS5D01G197700.2 Wheat plastid 29.8 18.08
TraesCS2D01G478100.1 Wheat nucleus 14.39 16.56
TraesCS1D01G118300.1 Wheat nucleus, plastid 29.36 16.5
TraesCS2D01G378500.3 Wheat nucleus 15.99 16.22
TraesCS2D01G477200.1 Wheat mitochondrion, nucleus 17.3 16.12
TraesCS2D01G566400.1 Wheat nucleus 17.01 15.88
TraesCS6D01G208400.1 Wheat nucleus 15.26 15.42
CDY01852 Canola plasma membrane 33.87 12.55
TraesCS5D01G193000.2 Wheat nucleus 19.48 11.93
TraesCS6D01G254900.2 Wheat nucleus 17.3 7.37
TraesCS5D01G192900.1 Wheat cytosol 0.87 3.68
CDY21127 Canola cytosol 0.0 0.0
CDX89821 Canola cytosol 0.0 0.0
CDX86631 Canola cytosol 0.0 0.0
CDY53193 Canola mitochondrion 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.7MapMan:12.5.1.16.1Gene3D:2.170.270.10Gene3D:2.30.280.10GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009987
GO:GO:0016043GO:GO:0016571GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plantInterPro:IPR001214InterPro:IPR003105InterPro:IPR003616InterPro:IPR007728InterPro:IPR025794
InterPro:IPR036987PFAM:PF00856PFAM:PF02182PFAM:PF05033PFscan:PS50280PFscan:PS50867
PFscan:PS50868PFscan:PS51015PFscan:PS51575PANTHER:PTHR22884PANTHER:PTHR22884:SF369InterPro:PUA-like_sf
InterPro:Post-SET_domInterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00466SMART:SM00468
InterPro:SRA-YDG_sfInterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697EnsemblPlantsGene:TraesCS5D01G152000EnsemblPlants:TraesCS5D01G152000.1
SEG:seg:::::
Description
No Description!
Coordinates
chr5D:-:241111938..241114561
Molecular Weight (calculated)
75883.0 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.557
Length
688 amino acids
Sequence
(BLAST)
001: MEFTMGSLID EAETGEQPLD PKPLHSLAPM FPTPPGYDVA ISDPPFFYIT PIQQHPGPGA ASFAGPPPQQ HPGPAPASSA GPSPGPGSAV PLKATPISAA
101: FPARRPKEEL SDEDYTPASE KRKPSSSSPK RTAKKVRQAG DSTAVNTKQR PIRRSLSKEL AGWPSTSDNP REAVEATMAM FDSLRRRTLQ LDEKEGLGRR
201: ADLKASVLMN QNNLKINSLK TIGPVPGVEI GDIFFYRIEM CIVGLHAPSM AGIDYLSAKL AGRDESLAVS IISSGGYENV EDETDTLVYT GQGGNSRRKD
301: KEKHDQKLEK GNLALSNSAS KKNQIRVVRS ARDPFSITAG KVYIYDGVYR IEDSWMDTAK SGFSVFKYRL RREPGQPDGF SVWKMTDKWK ANRATRENAM
401: VLDLSSGAEI LPVCLVNEVD GERGPSHFKY VTGVKHSRPL SRNRPLHHCE CTSVCMPGDP NCSCARQNGG DLPYNLDGVL ARHVPMLYEC SRDCHCTKDC
501: RNRVAQRGVQ LNFEVFRTRD RGWGLRSWDP IRAGAFVCEY AGQVMDETNM SMDVQEDEYT FRTTCPNDKA VRWNLGAELL EEKGADDATA ERFKRLPVVI
601: SAKDAGNVAR FINHSCSPNL LWQAVQYDHT DNSYPHIMFF AMKHIPPMTE LTYDYGIRGA PPGIKGKSPL ACKLRPCLCG SANCRGSF
Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)
001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
Arabidopsis Description
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.