Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74191 | Canola | mitochondrion | 1.23 | 1.43 |
| TraesCS3D01G307900.1 | Wheat | nucleus | 2.45 | 1.2 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 4.91 | 1.17 |
| TraesCS2D01G566400.1 | Wheat | nucleus | 4.91 | 1.09 |
| CDX74192 | Canola | nucleus | 3.07 | 1.07 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 4.29 | 1.04 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 4.29 | 1.04 |
| TraesCS5D01G197700.2 | Wheat | plastid | 6.75 | 0.97 |
| TraesCS2D01G477200.1 | Wheat | mitochondrion, nucleus | 4.29 | 0.95 |
| TraesCS2D01G378500.3 | Wheat | nucleus | 3.68 | 0.88 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 3.68 | 0.87 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 3.07 | 0.84 |
| TraesCS2D01G389100.1 | Wheat | nucleus | 4.91 | 0.83 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 3.68 | 0.81 |
| TraesCS5D01G193000.2 | Wheat | nucleus | 5.52 | 0.8 |
| TraesCS1D01G118300.1 | Wheat | nucleus, plastid | 5.52 | 0.74 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 3.68 | 0.73 |
| TraesCS3D01G433900.1 | Wheat | nucleus | 3.07 | 0.72 |
| TraesCS1D01G241500.1 | Wheat | nucleus | 3.07 | 0.61 |
| TraesCS2D01G240000.1 | Wheat | nucleus | 1.23 | 0.3 |
| TraesCS6D01G254900.2 | Wheat | nucleus | 2.45 | 0.25 |
| TraesCS4D01G204500.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G450700.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G450600.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1D01G043400.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G378200.1 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G192900.1 | EnsemblPlantsGene:TraesCS5D01G192900 | InterPro:RVT-Znf | PANTHER:PTHR33033 | PANTHER:PTHR33033:SF54 | PFAM:PF13966 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:297145808..297146950
Molecular Weight (calculated)
17695.0 Da
IEP (calculated)
9.195
GRAVY (calculated)
0.162
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVGRLLAHE SLANRMKIQR LGVELDTACP VCHRLNEDGG HIFLKCKKVK ECRSRLALGG LREILVKHKS AHEMLGELWK ADSASQLRAL VLCGSGGMSG
101: RKPTQGSQFL VLRDDFAAAG AGTSVHLRDL LHSEAVVCLA AIDGAIRLGA NRIIFESLML PIL
101: RKPTQGSQFL VLRDDFAAAG AGTSVHLRDL LHSEAVVCLA AIDGAIRLGA NRIIFESLML PIL
001: MKARYFKDVS ILDAKVRKQQ SYGWASLLDG IALLKKGTRH LIGDGQNIRI GLDNIVDSHP PRPLNTEETY KEMTINNLFE RKGSYYFWDD SKISQFVDQS
101: DHGFIHRIYL AKSKKPDKII WNYNTTGEYT VRSGYWLLTH DPSTNIPAIN PPHGSIDLKT RIWNLPIMPK LKHFLWRALS QALATTERLT TRGMRIDPSC
201: PRCHRENESI NHALFTCPFA TMAWRLSDSS LIRNQLMSND FEENISNILN FVQDTTMSDF HKLLPVWLIW RIWKARNNVV FNKFRESPSK TVLSAKAETH
301: DWLNATQSHK KTPSPTRQIA ENKIEWRNPP ATYVKCNFDA GFDVQKLEAT GGWIIRNHYG TPISWGSMKL AHTSNPLEAE TKALLAALQQ TWIRGYTQVF
401: MEGDCQTLIN LINGISFHSS LANHLEDISF WANKFASIQF GFIRRKGNKL AHVLAKYGCT YSTFYSGSGS LPIWLDRYFC NDSN
101: DHGFIHRIYL AKSKKPDKII WNYNTTGEYT VRSGYWLLTH DPSTNIPAIN PPHGSIDLKT RIWNLPIMPK LKHFLWRALS QALATTERLT TRGMRIDPSC
201: PRCHRENESI NHALFTCPFA TMAWRLSDSS LIRNQLMSND FEENISNILN FVQDTTMSDF HKLLPVWLIW RIWKARNNVV FNKFRESPSK TVLSAKAETH
301: DWLNATQSHK KTPSPTRQIA ENKIEWRNPP ATYVKCNFDA GFDVQKLEAT GGWIIRNHYG TPISWGSMKL AHTSNPLEAE TKALLAALQQ TWIRGYTQVF
401: MEGDCQTLIN LINGISFHSS LANHLEDISF WANKFASIQF GFIRRKGNKL AHVLAKYGCT YSTFYSGSGS LPIWLDRYFC NDSN
Arabidopsis Description
Putative non-LTR reverse transcriptase [Source:UniProtKB/TrEMBL;Acc:Q9SF52]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.