Factsheet for TraesCS5D01G197700.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G190000.1	Wheat	plastid	95.24	94.65
TraesCS5A01G194500.1	Wheat	plastid	91.18	89.21
HORVU5Hr1G057440.1	Barley	plastid	89.95	87.7
OQU80399	Sorghum	nucleus	31.92	63.51
Os09t0362900-01	Rice	mitochondrion, nucleus	47.09	57.98
EER96634	Sorghum	nucleus	55.91	50.88
Zm00001d005650_P001	Maize	plastid	54.94	47.89
TraesCS5D01G193000.2	Wheat	nucleus	35.98	36.33
TraesCS1D01G118300.1	Wheat	nucleus, plastid	39.15	36.27
TraesCS1D01G307700.1	Wheat	nucleus	18.43	31.01
TraesCS1D01G366800.1	Wheat	nucleus	18.43	30.92
TraesCS3D01G433900.1	Wheat	nucleus	18.34	30.14
TraesCS2D01G389100.1	Wheat	nucleus	25.31	29.9
TraesCS5D01G152000.1	Wheat	nucleus	18.08	29.8
TraesCS2D01G240000.1	Wheat	nucleus	17.55	29.48
TraesCS3D01G329100.1	Wheat	nucleus	19.22	29.34
TraesCS1D01G043400.1	Wheat	nucleus	15.34	27.19
TraesCS3D01G307900.1	Wheat	nucleus	7.76	26.51
TraesCS3D01G450600.1	Wheat	nucleus	15.52	25.92
TraesCS1D01G241500.1	Wheat	nucleus	18.69	25.89
TraesCS4D01G278500.1	Wheat	nucleus	18.34	25.4
TraesCS4D01G204500.1	Wheat	nucleus	14.99	25.04
TraesCS3D01G450700.1	Wheat	nucleus	14.73	23.89
TraesCS3D01G378200.1	Wheat	plastid	13.84	22.92
TraesCS2D01G478100.1	Wheat	nucleus	8.99	17.06
TraesCS6D01G208400.1	Wheat	nucleus	9.7	16.15
TraesCS2D01G378500.3	Wheat	nucleus	9.61	16.08
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	9.88	15.18
TraesCS2D01G566400.1	Wheat	nucleus	9.35	14.38
TraesCS6D01G254900.2	Wheat	nucleus	12.52	8.79
TraesCS5D01G192900.1	Wheat	cytosol	0.97	6.75

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
EnsemblPlantsGene:TraesCS5D01G197700	EnsemblPlants:TraesCS5D01G197700.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:300945343..300949105

Molecular Weight (calculated)

122036.0 Da

IEP (calculated)

6.926

GRAVY (calculated)

-0.531

Length

1134 amino acids

Sequence
(BLAST)

0001: MVGVEPPAPP SRTPIGARLA ARGVRPRRVS AKRSWPPGCG RFRAAPPAPE AGDGERGATN GVIEGRVEEA ASHAGVSLAA APPQPDTEGL AEGTKEVGDA
0101: IDAVVVSSAA CNGDLPHAPP QPETMPEERK EGRETHMDRA GVSSVACNGD LPHGLPQPET EGMVQLRKEG GEAHMDTADV PSVASNSDLP HAPPQPETMV
0201: EVRKEGGEAQ PSSGGDARGQ AESRAIEVMP LAFAAPKSFA VASVNGSVEN GGDGAESLLM EGNRGLGSGR LVREEDVAGN GNGSVMENRT GNGELERKED
0301: GHDTVRKKRW LMSAVNPPPK RRAISAVRNF PPGCGRDAVT GTGSGVEEGS VLEATPISFA TRGASVVDAL TAAPVSGHGA SPVVVRDASN EEVQGKRAEV
0401: VGAGDGEVRG KFDGTLRKGT PKTYVRSRFV DAKTKGKRPK DVAMNDTLRG DGTLKNKNSR DDVRSNSNTK HGVVKLKSYG IGKDSLIRSS KESKCGNHDM
0501: TNQSEETDDL TFISDKLIVQ ALMAPDKCPW TKGRKSSASA SNSLTPRNKS LPPKKPKKKD ATPRKELPPK VTPSTSAVHE KIEHGEYSCL EDDDNPMALV
0601: VHERKELCVT LPPCAPFGDQ SVDARSKVRK LLKLFQLICR KLMQAEEQQL RNVGRIDLEA VEVLKKYDGY SKPDAIVGSV PGVVVGDEFH FRVELSIVGL
0701: HRIYQGGIDS AIVDGTRIAI SIVASGGYPD ELSSSDELIY TGSGGKATGK KEAEDQKLKG GNLALKNCIK TKTPVRVIHG FKGQSRSEVG HSKSKQISTY
0801: TYDGLYVVVD CWQEGASGSM VFKYKLKRIP GQPELALHIV KETRMSKVRK GLRCPDISLE KERIPICVIN TIDDAQPTPF EYITKVIYPP SYAKEPPHGC
0901: DCTDGCSDSS RCACAVKNGG EIPFNFNGAI VHAKPLIYEC GPSCRCPPTC HNRASQHGIK IPLEIFKTGE TGWGVRSLSS ISSGSFICEY AGELLQDTEA
1001: EKIENDEYLF DIGHNYDDEE LWKGLPSMIP GLESSTSETM QEAVGFTIDA AKCGNVGRFI NHSCSPNLYA QNVLWDHDDK RMPHIMFFAA ENIPPLQELT
1101: YHYNYTIGQV RDKNGVEKVK ECLCGSADCC HRLY

Best Arabidopsis Sequence Match ( AT2G22740.2 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.