Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G242900.1 | Wheat | cytosol | 94.69 | 94.69 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 87.29 | 87.12 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 82.16 | 79.3 |
| Os09t0463700-01 | Rice | nucleus | 40.61 | 57.53 |
| KXG35797 | Sorghum | nucleus | 39.28 | 53.91 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 27.32 | 48.65 |
| Zm00001d020762_P001 | Maize | nucleus | 39.47 | 47.27 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 18.98 | 30.77 |
| GSMUA_Achr10P... | Banana | cytosol | 22.58 | 28.27 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 21.44 | 28.18 |
| AT5G09540.1 | Thale cress | nucleus | 14.8 | 27.86 |
| CDY21586 | Canola | cytosol | 15.18 | 27.68 |
| CDY69792 | Canola | cytosol | 15.18 | 27.3 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 20.11 | 27.11 |
| Bra009389.1-P | Field mustard | cytosol | 14.99 | 26.96 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 18.98 | 24.81 |
| CDY31322 | Canola | cytosol | 17.08 | 24.13 |
| Bra031921.1-P | Field mustard | cytosol | 16.89 | 24.12 |
| AT5G64360.7 | Thale cress | nucleus | 18.98 | 21.55 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 19.54 | 21.19 |
| Solyc07g007230.2.1 | Tomato | nucleus | 17.08 | 21.13 |
| KRH42098 | Soybean | nucleus | 17.84 | 20.66 |
| KRH10601 | Soybean | nucleus | 19.35 | 20.52 |
| KRH49811 | Soybean | nucleus | 18.03 | 20.17 |
| TraesCS1D01G139900.1 | Wheat | plastid | 7.78 | 20.0 |
| Bra024289.1-P | Field mustard | nucleus | 16.89 | 19.39 |
| CDX84519 | Canola | nucleus | 17.46 | 19.37 |
| KRH21766 | Soybean | nucleus | 17.84 | 18.84 |
| CDY58269 | Canola | nucleus | 16.89 | 17.73 |
| PGSC0003DMT400079004 | Potato | cytosol | 17.08 | 17.61 |
| CDY45966 | Canola | nucleus | 23.34 | 16.53 |
| Bra027007.1-P | Field mustard | nucleus | 23.15 | 16.35 |
| CDY46799 | Canola | nucleus | 12.14 | 16.33 |
| CDY45473 | Canola | nucleus | 22.96 | 16.18 |
| Solyc11g006170.1.1 | Tomato | nucleus | 18.98 | 15.41 |
| PGSC0003DMT400073845 | Potato | cytosol | 18.98 | 15.34 |
| Solyc11g006140.1.1 | Tomato | nucleus | 16.32 | 14.45 |
| PGSC0003DMT400083794 | Potato | nucleus | 19.92 | 14.13 |
| AT1G62970.1 | Thale cress | nucleus | 20.11 | 13.3 |
| Solyc01g105780.2.1 | Tomato | nucleus | 17.65 | 12.97 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G252200.1 | EnsemblPlantsGene:TraesCS5D01G252200 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PANTHER:PTHR45496 | SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:+:357897757..357899340
Molecular Weight (calculated)
56122.2 Da
IEP (calculated)
10.003
GRAVY (calculated)
-0.521
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAAAAARR QADKWMSVAE KLLMAKDLEG CKEFSSQAIA ADPRTPGAED LYAAADVLLA SQRRRLPSGQ PDPYAVLGLD PAKPASRLPD VVHSKFRRLS
101: LLLNRSHPDR PCSVYVAEAA RLVADAWAFL SNAGLKSALD AELDAAAAPR APMQQPAVER RPQPSPPPQQ SPVWAAPQPR PPPQRIPVRP APQPTPPPQP
201: SSLRAATQTP PPPQPSSLRA ATQTPPPPQP SPLQPATQPQ PSPQPSRLQA ATRPPPSPQP SPSQAATKPL PSPQPSPLQP ATQPPPRPQP SLLQAASQPP
301: AGVATPPVES GTSPASTFWT LCKGCSHIHQ YDRLYEARKL KCSSCHQPFV AEAMAEPPPI VPGTDMYYCT WGFFPIGFPG CPGYADLVNS QSQGSDQLNV
401: PWLGANGRVA AENGTPITIG AAREEPVASE PSPEPVMRTR VEVPLVPEPA PEPLMRMRVG VPAVPEPVMP TRVEVPAASE PVMPTRVEVP AAPEPVQPTR
501: VKSVKVGAKK RGRPKGSKNK KNLRVVT
101: LLLNRSHPDR PCSVYVAEAA RLVADAWAFL SNAGLKSALD AELDAAAAPR APMQQPAVER RPQPSPPPQQ SPVWAAPQPR PPPQRIPVRP APQPTPPPQP
201: SSLRAATQTP PPPQPSSLRA ATQTPPPPQP SPLQPATQPQ PSPQPSRLQA ATRPPPSPQP SPSQAATKPL PSPQPSPLQP ATQPPPRPQP SLLQAASQPP
301: AGVATPPVES GTSPASTFWT LCKGCSHIHQ YDRLYEARKL KCSSCHQPFV AEAMAEPPPI VPGTDMYYCT WGFFPIGFPG CPGYADLVNS QSQGSDQLNV
401: PWLGANGRVA AENGTPITIG AAREEPVASE PSPEPVMRTR VEVPLVPEPA PEPLMRMRVG VPAVPEPVMP TRVEVPAASE PVMPTRVEVP AAPEPVQPTR
501: VKSVKVGAKK RGRPKGSKNK KNLRVVT
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.