Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G377600.1 | Wheat | extracellular | 55.84 | 94.51 |
| TraesCS5D01G377700.1 | Wheat | peroxisome | 94.16 | 94.16 |
| TraesCS5A01G368200.1 | Wheat | peroxisome | 93.51 | 93.51 |
| TraesCS5B01G370500.2 | Wheat | peroxisome | 89.61 | 88.46 |
| Os01t0882100-00 | Rice | cytosol, peroxisome | 16.23 | 80.65 |
| HORVU2Hr1G125430.2 | Barley | cytosol, peroxisome | 77.27 | 76.28 |
| OQU87989 | Sorghum | peroxisome | 63.64 | 61.64 |
| TraesCS5D01G037100.1 | Wheat | peroxisome | 42.21 | 40.37 |
| TraesCS2D01G304600.1 | Wheat | peroxisome | 38.31 | 39.6 |
| TraesCS3D01G162100.1 | Wheat | peroxisome | 31.17 | 28.92 |
| TraesCS3D01G162200.1 | Wheat | cytosol | 32.47 | 28.57 |
| TraesCS4D01G134100.1 | Wheat | cytosol | 29.22 | 24.19 |
| TraesCS4D01G134200.1 | Wheat | cytosol | 28.57 | 23.66 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G377900.1 | EnsemblPlantsGene:TraesCS5D01G377900 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:PAAI_dom | InterPro:Thioestr_dom |
| PANTHER:PTHR21660 | PANTHER:PTHR21660:SF15 | PFAM:PF03061 | SUPFAM:SSF54637 | TIGR:cd03443 | TIGRFAMs:TIGR00369 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:449692450..449693187
Molecular Weight (calculated)
16419.8 Da
IEP (calculated)
8.724
GRAVY (calculated)
0.010
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLEGGSKD VYEAMQRWHN RSLGHRLYDA FTVAGLRVEA IEPGRLLCSF MVPPRLTSSA SNRMHGGAVA SLVDLVGSAV IFTGGSPVTG VSLDITVSYL
101: GAAHANEEIE VEARVLGIGD KTGCVTVEVR RKDTGQVLAH GRHTKYLANV SSKL
101: GAAHANEEIE VEARVLGIGD KTGCVTVEVR RKDTGQVLAH GRHTKYLANV SSKL
001: MDLESVKKYL EGDEDEKAKE PMVAKLPHRF LERFVTNGLK VDLIEPGRIV CSMKIPPHLL NAGKFLHGGA TATLVDLIGS AVIYTAGASH SGVSVEINVS
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
101: YLDAAFLDEE IEIESKALRV GKAVAVVSVE LRKKTTGKII AQGRHTKYFA PRSNL
Arabidopsis Description
F19P19.27 protein [Source:UniProtKB/TrEMBL;Acc:P93828]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.