Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| EnsemblPlants:TraesCS5D01G407600.1 | EnsemblPlantsGene:TraesCS5D01G407600 | InterPro:TIP41-like | PANTHER:PTHR21021 | PANTHER:PTHR21021:SF25 | PFAM:PF04176 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:472630042..472632812
Molecular Weight (calculated)
31831.0 Da
IEP (calculated)
5.025
GRAVY (calculated)
-0.086
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAWDGP TAGELKAAGA EAIPGGVRVK GWVIQTHKGP ILNSASVSLY EDKLQTTHLP EMVFGESFVS IQNAQTGVKL HFNALDALKA WKQEALPPVQ
101: VPAAAKWKFR SNPADQVVLD YDYTFTTPYC GSDVVLNQDA TQTSLDECSN LCWEDTDDRI DLVALSAKEP ILFYDEVILY EDELADSGIS FLTARVRVMP
201: TGWFLLLRFW LRVDGALMRL RDTRLHCSFG SKEAKPVVLR ELCWREATFA AMSAEGYPSD SAAYADPNLV ARKLPVVMQK TQKLKIPS
101: VPAAAKWKFR SNPADQVVLD YDYTFTTPYC GSDVVLNQDA TQTSLDECSN LCWEDTDDRI DLVALSAKEP ILFYDEVILY EDELADSGIS FLTARVRVMP
201: TGWFLLLRFW LRVDGALMRL RDTRLHCSFG SKEAKPVVLR ELCWREATFA AMSAEGYPSD SAAYADPNLV ARKLPVVMQK TQKLKIPS
001: METVVDKDVL KSSGAELLPD GRRGLRIHDW EIETLRGTIL TSLAVEEWEK KLKTSHLPEM VFGENALVLK HLGSNTKIHF NAFDALAGWK QEGLPPVEVP
101: AAAQWKFRSK PSQQVILDYD YTFTTPYCGS EVVEKDKETV EAKANPKGEA TLQWENCEDQ IDLAALSLKE PILFYDEVVL YEDELADNGV SLLTVKVRVM
201: PSSWFLLLRF WLRVDGVLMR LRETRMHYRF GEDEAPTVLR ENCWREATFQ SLSAKGYPVD LAVWSDPSSI SQRLPVIKHT TQKLKIPSKV
101: AAAQWKFRSK PSQQVILDYD YTFTTPYCGS EVVEKDKETV EAKANPKGEA TLQWENCEDQ IDLAALSLKE PILFYDEVVL YEDELADNGV SLLTVKVRVM
201: PSSWFLLLRF WLRVDGVLMR LRETRMHYRF GEDEAPTVLR ENCWREATFQ SLSAKGYPVD LAVWSDPSSI SQRLPVIKHT TQKLKIPSKV
Arabidopsis Description
TIP41LTIP41-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q8VXY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.