Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| MapMan:17.3.3.2.1 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR001841 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR12389 | SMART:SM00184 |
| SMART:SM00744 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS5D01G553700 | EnsemblPlants:TraesCS5D01G553700.1 | InterPro:Znf_RING | InterPro:Znf_RING-CH |
| InterPro:Znf_RING/FYVE/PHD | TIGR:cd16491 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:558284092..558294444
Molecular Weight (calculated)
197709.0 Da
IEP (calculated)
5.442
GRAVY (calculated)
0.044
Length
1760 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLVTAVKK GLAPHLKSLM GPWWFSQFDP AAEVAQAGRR SFEAAFPQSD RRLDALMLCV KETFVYLNEN LKLTTQALSD KVTPTDELED MHHRVISSSL
0101: LAMATLIDIL LGVKLKSNGG ESANTESKSH LKVRSATLSS AEAALSMHKY FIDFLKSKSA AIRSATYTLL TSYIKYVPHV FNEEAMKILS STILGAFNEK
0201: DPLCHSAMWD TILVFSRKFP EAWSYCNIHK VVLNRFWHFL QNGCYGSKQA SYPLIVQFLD VIPSEVATEK FAIEFLQNLW AGRNQRQLSA ADSLAFFTAF
0301: KLSFLWLLKK VPRNSVGDSS DNIHNRLITN VLVKIVWHDY LQLSLSKNLD TIPGLLSEEA TTDDHQLSHK SLLVQNVRLP IYYYQDLGKC IVEILDEISV
0401: AESHLLEVAC ESLLRDYLDI VHQGEKLSKF QDHVDQLASF FCSLDLLVVQ NGRTWPLENL ARPLVIHSLP AIKSMDSPSL VKLLLNLVEI FGPVHLFLKY
0501: SEKNDDKSYV EPYLNVFNSD FVPWCLDGKH ITCSSKIDLL LSLIQEECFF DQWCLIIKYI IAKQKRSVDD KISHTNDQFE LLTLILQKVR ERIAGGKLRN
0601: LQRSGSLPEH WRHDLLDSVA VSVFCDLPAT DSHVHFLCAA LGGSSQDDQV CFLSAEAVCK IRESILKSLA SVLTTSTFEW TRSAHFLLLP AEHEHLKLLG
0701: EQSLLANFEM AQFAFQVFER SLFALRIHEE DSVFSHILAA LFIIEWECSM ALTLEEENDL EGHKEEIDAE TLLCNSSDDR LGATVHLKAN LAEHIHAFRQ
0801: SLIPSFWNDL RSDTLNRLAN ILAQSVRYSV FDTRDLGIDR TAALCSEWVV DMLRLVCLDH IKLQSFYDIL LSEREDWPLW VKPSLQNGHA SVKFQCEPLA
0901: TEETELKHQR FVAFVDKIVL NLSFGEVILG IPRNQHCTTS SSIDVTSPVS SFSRAWVAAE MICTWKWKGG SAFSTFLPSL VQYMKTESCP EVSIMPFLLD
1001: TLLEGALMHE SSNWALFNVW HLSDSEIDKI QDRFLRALVA LLFTTYTKER IWRESDALAL FEKLLEKMKS GEASSCTDLM GESILSWLNE AISCLSLSPR
1101: EVTQQDIEDW MQVVLSCFPL EITGGTAKLV VKFDREISDA ETSLLLTLFS RYRAFYASAD PSLSSSGTSL SKTAELLGVK LTAVMVGYCC TKLGEDDWCF
1201: VFRILRKWIE SSVLLVEEMT DGVNDAVINR TSAEDILEKL KLIACTPEEL TFTFAESALV TLCCINHVDS LHESQTLQLI RSGEYAESND KMMENVLRLF
1301: LASGVSEAIA GSCSEEASSI IASSRVVYLH FWELVASFII DASPQIRGCA LESMKLWGLS KDSVSGLYSI LFSSEPISHL QFAAYSLLMS EPICEVSLVN
1401: GENPQESDMD QQSIESTPDS EKALCLRDEL SALIEMPTSG LAKTDLIARD RVNVFVAWAL LLSHLQRLPL SSTSRALLLS YVQDKISPCI LDCIFQHIPL
1501: RSGSGGGASA SGKKKDAELV PEAKAAAEAS KNAIVTCSLL PYVESLWPVG VLEMASLAGS LYGMMIRLLP SYVRTWFTGL RDRSLSSSIE SLTRVWCSPP
1601: LLLDEFCQVK ESVYADETFS VSVNRSAYEI IATYKKEETG IDLVIRLPSC YPLRHVEVEC TRSLGISEVK CRKWLLSLTS FVRNQNGAVA EAIQTWKKNF
1701: DKEFEGVEEC PICYSILHTS NHGLPRLACK TCKHKFHGAC LYKWFSTSNK STCPLCQTPF
0101: LAMATLIDIL LGVKLKSNGG ESANTESKSH LKVRSATLSS AEAALSMHKY FIDFLKSKSA AIRSATYTLL TSYIKYVPHV FNEEAMKILS STILGAFNEK
0201: DPLCHSAMWD TILVFSRKFP EAWSYCNIHK VVLNRFWHFL QNGCYGSKQA SYPLIVQFLD VIPSEVATEK FAIEFLQNLW AGRNQRQLSA ADSLAFFTAF
0301: KLSFLWLLKK VPRNSVGDSS DNIHNRLITN VLVKIVWHDY LQLSLSKNLD TIPGLLSEEA TTDDHQLSHK SLLVQNVRLP IYYYQDLGKC IVEILDEISV
0401: AESHLLEVAC ESLLRDYLDI VHQGEKLSKF QDHVDQLASF FCSLDLLVVQ NGRTWPLENL ARPLVIHSLP AIKSMDSPSL VKLLLNLVEI FGPVHLFLKY
0501: SEKNDDKSYV EPYLNVFNSD FVPWCLDGKH ITCSSKIDLL LSLIQEECFF DQWCLIIKYI IAKQKRSVDD KISHTNDQFE LLTLILQKVR ERIAGGKLRN
0601: LQRSGSLPEH WRHDLLDSVA VSVFCDLPAT DSHVHFLCAA LGGSSQDDQV CFLSAEAVCK IRESILKSLA SVLTTSTFEW TRSAHFLLLP AEHEHLKLLG
0701: EQSLLANFEM AQFAFQVFER SLFALRIHEE DSVFSHILAA LFIIEWECSM ALTLEEENDL EGHKEEIDAE TLLCNSSDDR LGATVHLKAN LAEHIHAFRQ
0801: SLIPSFWNDL RSDTLNRLAN ILAQSVRYSV FDTRDLGIDR TAALCSEWVV DMLRLVCLDH IKLQSFYDIL LSEREDWPLW VKPSLQNGHA SVKFQCEPLA
0901: TEETELKHQR FVAFVDKIVL NLSFGEVILG IPRNQHCTTS SSIDVTSPVS SFSRAWVAAE MICTWKWKGG SAFSTFLPSL VQYMKTESCP EVSIMPFLLD
1001: TLLEGALMHE SSNWALFNVW HLSDSEIDKI QDRFLRALVA LLFTTYTKER IWRESDALAL FEKLLEKMKS GEASSCTDLM GESILSWLNE AISCLSLSPR
1101: EVTQQDIEDW MQVVLSCFPL EITGGTAKLV VKFDREISDA ETSLLLTLFS RYRAFYASAD PSLSSSGTSL SKTAELLGVK LTAVMVGYCC TKLGEDDWCF
1201: VFRILRKWIE SSVLLVEEMT DGVNDAVINR TSAEDILEKL KLIACTPEEL TFTFAESALV TLCCINHVDS LHESQTLQLI RSGEYAESND KMMENVLRLF
1301: LASGVSEAIA GSCSEEASSI IASSRVVYLH FWELVASFII DASPQIRGCA LESMKLWGLS KDSVSGLYSI LFSSEPISHL QFAAYSLLMS EPICEVSLVN
1401: GENPQESDMD QQSIESTPDS EKALCLRDEL SALIEMPTSG LAKTDLIARD RVNVFVAWAL LLSHLQRLPL SSTSRALLLS YVQDKISPCI LDCIFQHIPL
1501: RSGSGGGASA SGKKKDAELV PEAKAAAEAS KNAIVTCSLL PYVESLWPVG VLEMASLAGS LYGMMIRLLP SYVRTWFTGL RDRSLSSSIE SLTRVWCSPP
1601: LLLDEFCQVK ESVYADETFS VSVNRSAYEI IATYKKEETG IDLVIRLPSC YPLRHVEVEC TRSLGISEVK CRKWLLSLTS FVRNQNGAVA EAIQTWKKNF
1701: DKEFEGVEEC PICYSILHTS NHGLPRLACK TCKHKFHGAC LYKWFSTSNK STCPLCQTPF
0001: MGKPKGDAAR SKARPSSSSL AASLLPSGSA AAVGFGGYVG SSRFQTSLSN EDSASFLDLD SEVAQHLQRL SRKDPTTKIK ALASLSELVK QKQGKELLPI
0101: IPQWTFEYKK LILDYSRDVR RATHDVMTNV VTGAGRDIAP HLKSIMGPWW FSQFDLASEV SQAAKSSFQA AFPAQEKRLH ALNLCSAEIF AYLEENLKLT
0201: PQNLSDKSLA SDELEEMYQQ MISSSLVGLA TLLDILLREP DNTGSANINS ESKLASKARA VATSSAEKMF SSHKCFLNFL KSESPSIRSA TYSLLSSFIK
0301: NVPEVFGEGD VRSLAPALLG VFRENNPTCH SSMWEAVLLF SKKFPQSWVY LNVHKSVLNH LWQFLRNGCY GSPQVSYPAL ILFLEVMPAQ SVESDKFFVN
0401: FFKNLLAGRS MCESSSTDQL SLLRATTECF LWGLRNASRY CDVPNSIHDL QVDLIDKVLV KILWADFTEL SKGSIPPNQR KSAENLGMGN SVSYLQELGR
0501: CILEILSGIN LLEQNLLSFF CKAVQESFLN MLQQGDLEIV AGSMRKMIDF LLLLERYSVL EGESWPLHQF MGPLLSKAFP WIRSSELLDG VKLLSVSVSV
0601: FGPRKVVPVL IDDIETSTLL SVEKEKNMSP EKLIKVFQEI FIPWCMDGYD SSTAARQDLL FSLLDDECFT QQWSDVISYV FNQQHQGFNN LAAMKMLLEK
0701: ARDEITKRSS GQELNQRIGS RPEHWHHTLI ESTAISLVHS SSATTTSAVQ FLCSVLGGST QDSSISFVSR SSLVLIYRGI LEKLLSFIKQ SPLCSVNDTC
0801: SSLIVEAIAF DSSSSVDVIV VAKFAAEVID GSFFSLKSLS QDATLLTTVL SSIFIIDLEN RMTSLVDNTL SESKEKRKDR NFVCDYVHAV CSKMDNQFWK
0901: SINYDVRKSS ASTLAQFLRS VVLLEDDLQP FELTLLCASR MTEVLEYLSL DQSDEENICG LLLLESDAWP IWVSPSSSAS IDTHGMPVQL CELRKSKSQR
1001: YVSFIDSLIM KLGIHRFIVG HKDHGFASQA WLSVEILCTW EWPGGKVQTS FLPNLVSFCK DEPSSGGLLN SIFDILLNGA LVHVKDEEEG LGNMWVDFNN
1101: NIVDVVEPFL RALVSFLHIL FKEDLWGEEE AMAAFKMITD KLFIGEETSK NCLRIIPYIM SIIISPLRTK VKSGGSGKDT LLPLEVLLRN WLERSLSFPP
1201: LVLWQSGEDI QDWFQLVISC YPVSDKAEEA KELQRHLSTE ERTLLLDLFR KQKQDPGAST VVTQLPAVQI LLARLIMIAV SYCGNDFNED DWDFVFSNLK
1301: RLIQSAVVVM EETSENVNDF ISGVSSMEKE KENDTLEGLG HIVFISDPSI NSAQNALSAF SLLNALVNHK SVEGEDNLKS LADETWDPVK DRILEGVLRL
1401: FFCTGLTEAI AASYSPEAAS IVASFRVDHL QFWELVAHLV VDSSPRARDR AVRAVEFWGL SRGSISSLYA IMFSSNPIPS LQLAAYTVLS TEPISRLAIV
1501: ADLNAPLNDE SLNDQDSSNA GLPSEDKLLL RDEVSCMVEK LDHELLDTDL TAPERVQTFL AWSLLLSNVN SLPSLTQGRE RLVQYIEKTA NPLILDSLFQ
1601: HIPLELYMGQ SLKKKDGDIP SELSVVASAA TRAIITGSSL STVESLWPIE TGKMASLAGA IYGLMLRVLP AYVREWFSEM RDRSASSLIE AFTRTWCSPS
1701: LIKNELSQIK KADFNDESFS VSISKAANEV VATYTKDETG MDLVIRLPVS YPLKPVDVNC AKSIGISEAK QRKWLMSMQM FVRHQNGALA EAIRIWKRNS
1801: DKEFEGVEDC PICYSVIHIG NHSLPRRACV TCKYKFHKAC LDKWFYTSNK KLCPLCQSPC
0101: IPQWTFEYKK LILDYSRDVR RATHDVMTNV VTGAGRDIAP HLKSIMGPWW FSQFDLASEV SQAAKSSFQA AFPAQEKRLH ALNLCSAEIF AYLEENLKLT
0201: PQNLSDKSLA SDELEEMYQQ MISSSLVGLA TLLDILLREP DNTGSANINS ESKLASKARA VATSSAEKMF SSHKCFLNFL KSESPSIRSA TYSLLSSFIK
0301: NVPEVFGEGD VRSLAPALLG VFRENNPTCH SSMWEAVLLF SKKFPQSWVY LNVHKSVLNH LWQFLRNGCY GSPQVSYPAL ILFLEVMPAQ SVESDKFFVN
0401: FFKNLLAGRS MCESSSTDQL SLLRATTECF LWGLRNASRY CDVPNSIHDL QVDLIDKVLV KILWADFTEL SKGSIPPNQR KSAENLGMGN SVSYLQELGR
0501: CILEILSGIN LLEQNLLSFF CKAVQESFLN MLQQGDLEIV AGSMRKMIDF LLLLERYSVL EGESWPLHQF MGPLLSKAFP WIRSSELLDG VKLLSVSVSV
0601: FGPRKVVPVL IDDIETSTLL SVEKEKNMSP EKLIKVFQEI FIPWCMDGYD SSTAARQDLL FSLLDDECFT QQWSDVISYV FNQQHQGFNN LAAMKMLLEK
0701: ARDEITKRSS GQELNQRIGS RPEHWHHTLI ESTAISLVHS SSATTTSAVQ FLCSVLGGST QDSSISFVSR SSLVLIYRGI LEKLLSFIKQ SPLCSVNDTC
0801: SSLIVEAIAF DSSSSVDVIV VAKFAAEVID GSFFSLKSLS QDATLLTTVL SSIFIIDLEN RMTSLVDNTL SESKEKRKDR NFVCDYVHAV CSKMDNQFWK
0901: SINYDVRKSS ASTLAQFLRS VVLLEDDLQP FELTLLCASR MTEVLEYLSL DQSDEENICG LLLLESDAWP IWVSPSSSAS IDTHGMPVQL CELRKSKSQR
1001: YVSFIDSLIM KLGIHRFIVG HKDHGFASQA WLSVEILCTW EWPGGKVQTS FLPNLVSFCK DEPSSGGLLN SIFDILLNGA LVHVKDEEEG LGNMWVDFNN
1101: NIVDVVEPFL RALVSFLHIL FKEDLWGEEE AMAAFKMITD KLFIGEETSK NCLRIIPYIM SIIISPLRTK VKSGGSGKDT LLPLEVLLRN WLERSLSFPP
1201: LVLWQSGEDI QDWFQLVISC YPVSDKAEEA KELQRHLSTE ERTLLLDLFR KQKQDPGAST VVTQLPAVQI LLARLIMIAV SYCGNDFNED DWDFVFSNLK
1301: RLIQSAVVVM EETSENVNDF ISGVSSMEKE KENDTLEGLG HIVFISDPSI NSAQNALSAF SLLNALVNHK SVEGEDNLKS LADETWDPVK DRILEGVLRL
1401: FFCTGLTEAI AASYSPEAAS IVASFRVDHL QFWELVAHLV VDSSPRARDR AVRAVEFWGL SRGSISSLYA IMFSSNPIPS LQLAAYTVLS TEPISRLAIV
1501: ADLNAPLNDE SLNDQDSSNA GLPSEDKLLL RDEVSCMVEK LDHELLDTDL TAPERVQTFL AWSLLLSNVN SLPSLTQGRE RLVQYIEKTA NPLILDSLFQ
1601: HIPLELYMGQ SLKKKDGDIP SELSVVASAA TRAIITGSSL STVESLWPIE TGKMASLAGA IYGLMLRVLP AYVREWFSEM RDRSASSLIE AFTRTWCSPS
1701: LIKNELSQIK KADFNDESFS VSISKAANEV VATYTKDETG MDLVIRLPVS YPLKPVDVNC AKSIGISEAK QRKWLMSMQM FVRHQNGALA EAIRIWKRNS
1801: DKEFEGVEDC PICYSVIHIG NHSLPRRACV TCKYKFHKAC LDKWFYTSNK KLCPLCQSPC
Arabidopsis Description
E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q9FGI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.