Factsheet for TraesCS6A01G020100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G025700.1	Wheat	cytosol	74.32	73.65
TraesCSU01G194300.1	Wheat	cytosol	51.81	73.45
HORVU6Hr1G003940.7	Barley	cytosol	69.34	68.61
TraesCS6B01G029600.1	Wheat	cytosol	69.34	68.51
KXG32385	Sorghum	cytosol	14.5	60.0
TraesCS1A01G061500.1	Wheat	cytosol	58.01	55.98
TraesCS7A01G146300.1	Wheat	cytosol	15.41	46.79
Os01t0310500-01	Rice	cytosol	40.48	41.49
TraesCS5A01G449700.1	Wheat	cytosol	11.63	35.81
TraesCS2A01G510300.1	Wheat	cytosol	30.82	29.91
TraesCS5A01G449800.1	Wheat	cytosol	31.42	29.42
Zm00001d024744_P002	Maize	cytosol	41.84	28.67
TraesCS2A01G510000.1	Wheat	cytosol	26.59	28.39
Os01t0310800-01	Rice	plasma membrane, plastid	24.47	21.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.25	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27005	PANTHER:PTHR27005:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G020100	EnsemblPlants:TraesCS6A01G020100.1	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:9372040..9378779

Molecular Weight (calculated)

73443.8 Da

IEP (calculated)

8.535

GRAVY (calculated)

-0.191

Length

662 amino acids

Sequence
(BLAST)

001: MDYQGSNVRD FLHVNGQVVL ERVNTNYNLR SFTQKEIEDI TGGYSTVLGE GGFGKVYKGK LDGLRPVAVK RYKNGTKKEE FAKEVIVHSQ INHKNVVRLF
101: GCCTEENALT IVMEFACNGN LYNILHCSRS DANGFVPFPL DKRLDIAIES AEVLSCMHSM YSPVLHGDIK PANILLDENF RPKISDFGIS RFLSADETQH
201: TRHVIGCIGY MDPLFCQSGI LTSKSDVYSF GVVLLEIITR KKAVDGNVIL AQSFVESLRK GKKVRLMFDE EIANDKKNIK FLEDVAKLVA ECLKMEAKMR
301: PEMVEVADRL RTIRKAYRQR KGRNSTGSNS GLIKSGKAQD MLSPTPVTAA TAKNTDKIPS YVVPTISMDE LKKITRNFSN DAVIGGLSSG CFFGVLNNGN
401: KSAIKILSTE EVTLEIPVVS RFRHENILQL LGYCVEGDNF LLAYEYASRG SLHDILHGKK NVTGAEPGLV LSWTQRVKIA LGAASGLECL HEKTEPCIIH
501: SCIKASNIFL FDSDVAKIGY PGFSRHPHYI DNILLDRPDC PGGKYYPPSS AYDAPEYAMY GEFSTMSDVY SFGVVVLELL TGRKAFDPSL SRGQQCLVTW
601: ARPRLDESKV HQCVDPRLGG DFPPKAAAKM AAVAALCTQH EKEHRPKISI MVKALRPLLV SK

Best Arabidopsis Sequence Match ( AT1G48210.1 )
(BLAST)

001: MSCFGWCGSE DFRNATDTGP RPAHNPAGYN GGHYQRADPP MNQPVIPMQP ISVPAIPVDE LRDITDNYGS KTLIGEGSYG RVFYGVLKSG GAAAIKKLDS
101: SKQPDQEFLS QISMVSRLRH DNVTALMGYC VDGPLRVLAY EFAPKGSLHD TLHGKKGAKG ALRGPVMTWQ QRVKIAVGAA RGLEYLHEKV SPQVIHRDIK
201: SSNVLLFDDD VAKIGDFDLS DQAPDMAARL HSTRVLGTFG YHAPEYAMTG TLSSKSDVYS FGVVLLELLT GRKPVDHTLP RGQQSLVTWA TPKLSEDKVK
301: QCVDARLLGE YPPKAVGKLA AVAALCVQYE ANFRPNMSIV VKALQPLLNP PRSAPQTPHR NPY

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HWU0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.