Factsheet for TraesCS6A01G041200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G039100.1	Wheat	cytosol	24.14	59.01
TraesCS2B01G552500.1	Wheat	plastid	16.9	54.96
TraesCS5A01G413900.1	Wheat	cytosol	22.49	53.15
TraesCS2A01G568700.1	Wheat	mitochondrion	14.49	47.3
TraesCS2A01G024900.1	Wheat	cytosol	17.03	46.85
TraesCS4A01G223900.1	Wheat	cytosol	10.04	44.63
TraesCS2A01G043100.1	Wheat	cytosol, extracellular, plasma membrane	14.23	44.09
TraesCS4A01G026700.1	Wheat	cytosol	7.62	42.86
TraesCS2A01G465900.1	Wheat	cytosol	37.99	41.64
TraesCS4A01G223200.1	Wheat	cytosol	16.39	40.19
TraesCS2A01G024700.1	Wheat	cytosol	16.65	39.94
TraesCS2A01G184500.1	Wheat	cytosol	16.26	39.63
TraesCS3A01G056300.1	Wheat	cytosol	16.14	39.44
TraesCS2A01G023800.1	Wheat	cytosol	26.68	39.25
TraesCS7A01G539300.1	Wheat	cytosol	16.01	38.89
TraesCS4A01G223600.1	Wheat	cytosol	16.01	37.39
TraesCS4A01G223800.1	Wheat	cytosol	15.37	37.23
TraesCS7A01G541000.1	Wheat	cytosol	13.34	36.46
TraesCS3A01G094800.1	Wheat	cytosol	15.12	36.28
TraesCS7A01G014800.1	Wheat	cytosol, plasma membrane	19.19	35.53
TraesCS2A01G023900.1	Wheat	cytosol	17.28	35.51
TraesCS7A01G539100.1	Wheat	cytosol	15.88	35.31
TraesCS4A01G026600.1	Wheat	cytosol	19.7	35.15
TraesCS2A01G023700.1	Wheat	cytosol	19.82	34.29
TraesCS7A01G541200.1	Wheat	cytosol	13.47	34.08
TraesCS7A01G015800.1	Wheat	cytosol	17.92	32.87
TraesCS2A01G563400.1	Wheat	cytosol	18.81	29.31
TraesCS5A01G433600.1	Wheat	cytosol	23.89	29.19
TraesCS4A01G481600.1	Wheat	cytosol	18.04	28.17
TraesCS1A01G030900.3	Wheat	cytosol	26.56	28.09
TraesCS4A01G481200.1	Wheat	cytosol	18.3	26.92
TraesCS2A01G578900.1	Wheat	cytosol, mitochondrion, plasma membrane, plastid	17.15	26.63
TraesCS7A01G015300.1	Wheat	cytosol	17.92	24.56
TraesCS6A01G041100.1	Wheat	cytosol	20.84	23.73
TraesCS4A01G484000.1	Wheat	cytosol	20.46	23.47
TraesCS5A01G292500.1	Wheat	cytosol	20.84	21.16
TraesCS4A01G481300.1	Wheat	cytosol, mitochondrion	18.81	19.76
TraesCS7A01G015200.1	Wheat	mitochondrion	20.58	19.19
TraesCS7A01G541100.1	Wheat	cytosol	23.0	16.92
TraesCS7A01G361500.1	Wheat	cytosol	15.25	14.98
TraesCS2A01G024200.1	Wheat	cytosol	15.88	12.27
TraesCS4A01G329800.2	Wheat	cytosol	5.59	11.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.46	Gene3D:2.130.10.10	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF00400	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR27002	PANTHER:PTHR27002:SF365	InterPro:PapD-like_sf	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00320	SUPFAM:SSF49354	SUPFAM:SSF50978	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6A01G041200	EnsemblPlants:TraesCS6A01G041200.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:21574135..21588270

Molecular Weight (calculated)

89086.7 Da

IEP (calculated)

6.231

GRAVY (calculated)

-0.233

Length

787 amino acids

Sequence
(BLAST)

001: MLHELHIKIW FASCVNLVVS SSWQDMDRAR VAPRPLPFHL LEEITDGFSE ERKLGAGAYG SVYKGQHKNG EIIAIKKLHS MPELNNQQFQ KEYLNLATLQ
101: HQNIVRLLGY CHETRGEYIE FNGRTIFAEN QHMALCFEYM CNGSLDNCLQ DESSGHDWKT RYKIIKGICK GLKYLHEELN PPVYHLDLKP ANILLDEQMN
201: PKIADFGLSK FFGDERTRVS ASAIGTIGYL PPEYINSSLV SNKLDVFSLG VIIIKTMTGR LGYSQSAEMP SEEFIDLVQE KWKNRIQGAS TDDIDSCAEL
301: VKTCIKIALN CVDADRHKRP NIGDIIRELD ETEIMTQFSQ ALTIDTGSTS LDEQDESGFL EVHPHQLRFP FFELNKAICP LLLSNSTEDN VAFRILSENH
401: MEELSELSGV VPPRSTQTYW LVMKKQPPAN TSEFAVTLES CIAHEDIADG DDQFLPEVLE LTQGNKVHKV TLMAVTSERT RSGVTKVIYR VDAAVPVDHH
501: LTQIDVHPTE PWILASHRRG GVSIWNYETQ ERVMRLKNLA PTDMMRSVKF IARKRWFMAG DFHGWIHVHS FAMNDEVTKF KGHDGVVISL VVHPSDPLVV
601: SSSVDRHIKL WNWEAGWRCV RKLKAHLNNV EKVVFNPWDS NCLASVGMDN MLKIWKISSP LPVTVLDCDE HQLTVDYFHP GGDRQYIVTG SVSGKARIWD
701: VKTNTCIRQI SGLQTDNSRC VGVVRPDCPL LVMTLQGNVT SLYNFDTDCY ENSIDFKLGD VLNFAYAEGI KSVVIGFFGG IAMMKIN

Best Arabidopsis Sequence Match ( AT1G52360.1 )
(BLAST)

001: MPLRLEIKRK LAQRSERVKS VDLHPTEPWI LASLYSGTLC IWNYQTQVMA KSFEVTELPV RSAKFVARKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEK GWACTQIFEG HSHYVMQVTF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHQKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLEGHTH NVSAVCFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301: REIPVASMDN TGKIIWAKHN EIQTANIKSI GADYEVTDGE RLPLSVKELG TCDLYPQSLK HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE
401: GECAVRESSS KIKIFSKNFQ EKRSIRPTFS AEKIFGGTLL AMCSSDFICF YDWAECRLIQ RIDVTVKNLY WADSGDLVAI ASDTSFYILK FNRDLVTSHF
501: DSGRPTEEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS SWKLNYCVGG EVTTMYHLDR PMYLLGYLAS QSRVFLVDKE FNVIGYTLLL SLIEYKTLVM
601: RGDLDKASEI LPTIPKDQHN SVAHFLESRG MIEDALEIAT DPDYRFELAI QLGRLEIAQE IAVEVQSESK WKQLGELAMS SGKLQMAEEC MKYAMDLSGL
701: LLLYSSLGDA EGVTKLATLA KEQGKNNVAF LCLFMLGKLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWRKDLSK VNSKAAESLA DPEEYSNLFE
801: DWQVALSVEA KAVETRGVYT GAKDYPSHAD KSSMTLVEAF RNLQVEEEES LENGDMDHEE VVAEENGNEQ RNEDDVAEHV EEHHEEKEAE EEEGIVDGDS
901: TDGAVLVNGS EADEEWGTNN EGNPSA

Arabidopsis Description

Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:F4ICX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.