Factsheet for TraesCS6A01G226600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G208400.1	Wheat	nucleus	97.94	97.94
TraesCS6B01G255000.1	Wheat	nucleus	97.21	97.21
HORVU6Hr1G057990.5	Barley	nucleus	91.34	77.08
TraesCS2A01G478800.1	Wheat	nucleus	65.64	74.5
Zm00001d051126_P004	Maize	nucleus	43.76	58.78
Os02t0621100-01	Rice	nucleus	62.11	57.09
OQU85329	Sorghum	nucleus	56.39	56.64
CDX92067	Canola	nucleus	31.86	45.97
AT3G04380.1	Thale cress	nucleus	32.89	45.53
GSMUA_Achr1P20340_001	Banana	nucleus	44.49	42.68
VIT_05s0049g01800.t01	Wine grape	nucleus	34.8	42.32
KRG97025	Soybean	nucleus	17.03	40.85
CDY49341	Canola	nucleus	32.45	39.68
PGSC0003DMT400051920	Potato	nucleus	28.78	38.51
KRH34133	Soybean	nucleus	38.77	38.48
KRH68776	Soybean	nucleus	37.44	37.67
TraesCS2A01G382000.5	Wheat	nucleus	37.15	37.37
KRG92731	Soybean	nucleus	38.91	37.17
Bra036004.1-P	Field mustard	nucleus	32.16	35.04
CDY14903	Canola	nucleus	32.75	34.84
KRG95723	Soybean	nucleus	36.27	34.12
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	42.44	34.08
KRH19618	Soybean	nucleus	40.53	33.58
KRH32246	Soybean	nucleus	40.38	33.5
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	36.27	33.15
PGSC0003DMT400044180	Potato	nucleus	37.44	33.07
AT5G43990.9	Thale cress	nucleus	35.83	32.97
Solyc09g090630.1.1	Tomato	nucleus	37.59	32.24
Solyc06g083760.2.1	Tomato	nucleus	40.38	31.94
Solyc09g072890.1.1	Tomato	nucleus	38.47	31.76
CDX94744	Canola	nucleus	31.57	31.39
TraesCS3A01G520700.1	Wheat	nucleus	13.22	31.25
AT1G04050.1	Thale cress	nucleus	33.63	31.2
CDY22319	Canola	nucleus	32.16	31.06
Bra001104.1-P	Field mustard	nucleus	32.75	29.5
Bra033710.1-P	Field mustard	nucleus	31.86	28.93
CDX96935	Canola	nucleus	32.75	28.44
CDY42922	Canola	plasma membrane, vacuole	32.31	26.57
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	12.92	26.51
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.16	23.25
TraesCS3A01G457900.1	Wheat	plastid	13.07	16.45
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	12.63	16.2
TraesCS3A01G441200.1	Wheat	nucleus	16.01	15.8
TraesCS5A01G140500.1	Wheat	nucleus	15.71	15.69
TraesCS1A01G362000.1	Wheat	nucleus	15.57	15.68
TraesCS3A01G385200.1	Wheat	plastid	16.59	15.56
TraesCS1A01G308300.1	Wheat	nucleus	15.27	15.43
TraesCS3A01G336100.1	Wheat	nucleus	16.01	14.63
TraesCS2A01G235400.1	Wheat	nucleus	13.51	13.73
TraesCS4A01G100900.1	Wheat	nucleus	13.51	13.69
TraesCS4A01G023500.1	Wheat	nucleus	16.45	13.43
TraesCS1A01G042900.1	Wheat	nucleus	12.48	13.16
TraesCS1A01G241600.2	Wheat	nucleus	14.83	12.33
TraesCS1A01G117300.1	Wheat	nucleus	16.15	11.62
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	14.83	10.02
TraesCS5A01G197900.1	Wheat	nucleus	14.54	9.98
TraesCS5A01G194500.1	Wheat	plastid	15.12	8.89
TraesCS6A01G274600.1	Wheat	nucleus	18.21	7.6
CDX92068	Canola	mitochondrion	0.15	0.71
CDY42923	Canola	mitochondrion	0.15	0.71

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	Gene3D:2.170.270.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728
InterPro:IPR025776	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280	PFscan:PS50867
PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF459	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2	EnsemblPlantsGene:TraesCS6A01G226600	EnsemblPlants:TraesCS6A01G226600.1	InterPro:WIYLD_domain

Description

No Description!

Coordinates

chr6A:-:426630664..426637404

Molecular Weight (calculated)

75684.5 Da

IEP (calculated)

6.325

GRAVY (calculated)

-0.434

Length

681 amino acids

Sequence
(BLAST)

001: MSSSNVFDEK FEAAVAKLDV IGIARKTVSP VLTKLLELYD YNWEYIEADD FRVLTDAIFD EPDPKELQKK QANKRKNPDS DHYNKKLRAK HHSQKPTSKM
101: HANEKRELAE APPQQEAGKL SPQTVCATVN TLQLSSSRLP IKERNMETSV LEDTPTDEDS LALSVQGQDL PTFETPLAIM SPPVQDSRHQ RVYKDAHERN
201: ISNTSGSQVI TSSTDSSTNF EVALSNSGTG KLSFTCNSAD HPDFHMPDME SVCKEMEARC LRTYKILEPN FSFIKLLQDT CQCIIDLGHA SSGPRESGMV
301: QIVPAIDFLS KPSVSRVLQP NEVGSSCMPP NDHIIHGGVC SSGSFAGEQI SSSNMLVIAN RPAHDVNDIT KGEEHVSIPI INKVGSGILP PPFHYIPCNI
401: IYQNAYVNLS LARIGDESCC SGCFGDCLAE QLPCACATVT GGEFAYTRDG LLKEGFLDSC VAGLPKFHCK ICNPCEGHST KKFIKECWSK CGCARNCGNR
501: VVQRGITRQL QVFLTPGKKG WGLQAAEEIP RGAFICEYVG EILTNTELDE RNTQGTSKGR HTYPTLLNAD WDTEDVLGDD HALCLDATFY GNVARFINHR
601: CSDANLIDIP VQIETPDRHY YHVAFFTKRK IEPFEELTWD YNIDFNDVNH PIKAFKCCCG SKHCRDKKSN PRSRSRALVL L

Best Arabidopsis Sequence Match ( AT5G43990.14 )
(BLAST)

001: MAPNLHIKKA FMAMRAMGIE DARVKPVLKN LLALYEKNWE LIAEDNYRVL ADAIFDSHED QAIQESEEKK ADEVKEDEGC AAEVDRGKKK LHESIEDDED
101: VMAESDRPLK RLRRRGEGGS ALASPSLGSP TLEGPSINDE ENAPILLPYH PVPIENDHDA DSVDRGDSSM LEIDKSNGHV EEKAGETVST ADGTTNDISP
201: TTVARFSDHK LAATIEEPPA LELASSASGE VKINLSFAPA TGGSNPHLPS MEELRRAMEE KCLRSYKILD PNFSVLGFMN DICSCYLDLA TNGRDSANQL
301: PKNLPFVTTN IDALKKSAAR MAYTSQASND VVEICSNEHM RDAENGAVGD SMALVVVPEC QLSADEWRLI SSVGDISLGK ETVEIPWVNE VNDKVPPVFH
401: YIAQSLVYQD AAVKFSLGNI RDDQCCSSCC GDCLAPSMAC RCATAFNGFA YTVDGLLQED FLEQCISEAR DPRKQMLLYC KECPLEKAKK EVILEPCKGH
501: LKRKAIKECW SKCGCMKNCG NRVVQQGIHN KLQVFFTPNG RGWGLRTLEK LPKGAFVCEL AGEILTIPEL FQRISDRPTS PVILDAYWGS EDISGDDKAL
601: SLEGTHYGNI SRFINHRCLD ANLIEIPVHA ETTDSHYYHL AFFTTREIDA MEELTWDYGV PFNQDVFPTS PFHCQCGSDF CRVRKQISKG KNVKKRA

Arabidopsis Description

SUVR2SET-domain containing protein lysine methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4K7E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.