Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G353200.1 | Wheat | endoplasmic reticulum | 94.05 | 93.33 |
| TraesCS6B01G405900.1 | Wheat | endoplasmic reticulum | 93.67 | 93.31 |
| TraesCS6B01G406400.1 | Wheat | endoplasmic reticulum | 90.98 | 93.12 |
| HORVU6Hr1G087250.1 | Barley | endoplasmic reticulum | 90.4 | 88.7 |
| TraesCS4A01G446300.1 | Wheat | cytosol | 24.18 | 60.58 |
| TraesCS7A01G041200.1 | Wheat | endoplasmic reticulum, plasma membrane | 50.67 | 51.56 |
| TraesCS4A01G446400.1 | Wheat | endoplasmic reticulum, plasma membrane | 50.48 | 51.47 |
| TraesCS6A01G005400.1 | Wheat | endoplasmic reticulum, plasma membrane | 49.71 | 50.49 |
| TraesCS1A01G442200.1 | Wheat | endoplasmic reticulum, plasma membrane | 43.19 | 45.36 |
| TraesCS1A01G442300.1 | Wheat | endoplasmic reticulum, extracellular | 45.3 | 45.3 |
| TraesCS6A01G012600.1 | Wheat | endoplasmic reticulum, extracellular | 43.19 | 43.19 |
| TraesCS7A01G411700.1 | Wheat | mitochondrion | 43.95 | 42.1 |
| TraesCS5A01G064200.1 | Wheat | endoplasmic reticulum | 41.07 | 40.15 |
| TraesCS5A01G214800.1 | Wheat | endoplasmic reticulum | 36.66 | 37.09 |
| TraesCS5A01G214600.1 | Wheat | endoplasmic reticulum | 36.47 | 36.89 |
| TraesCS2A01G428200.1 | Wheat | endoplasmic reticulum, golgi | 36.28 | 36.63 |
| TraesCS2A01G591400.1 | Wheat | endoplasmic reticulum | 35.7 | 35.91 |
| TraesCS3A01G331800.1 | Wheat | endoplasmic reticulum | 34.17 | 34.97 |
| TraesCS7A01G309300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 33.01 | 32.39 |
| TraesCS1A01G310500.1 | Wheat | golgi | 31.09 | 31.64 |
| TraesCS5A01G554000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.13 | 30.78 |
| TraesCS5A01G207700.1 | Wheat | endoplasmic reticulum | 21.69 | 29.27 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF177 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G369700 | EnsemblPlants:TraesCS6A01G369700.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:-:595002918..595004566
Molecular Weight (calculated)
57174.5 Da
IEP (calculated)
8.109
GRAVY (calculated)
-0.053
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGSATTIA MFQELLVLAI MYVVLHYLTR TILRTKRASP LPLPPGPRGY PVVGALPLLG RAPHRALAAL ARLHGPIMHL TLGRQGVVVA STPDAARLFL
101: RDHGGSFLDR PADDVAPTVL AYGAQDLVFA PYGPRWRRLR RECSLGLLGP QAVADWADAR RQEVGRMVRA MSRRGGAVEV PEFLFCAMAN IIGQAVVGRR
201: VLDEAGDEEA REFKEMVVEL MTTAGLVNLG DFLPAVAWMD LQGLGRRMRR LSARLDRVWS RLLSEHEAAV ADSDRQHGRQ PDLVDRLIAC RGDARAGEDG
301: VTDLNIKALL NNLFTAGTDT SSSTIEWALA EMLANPAILR RAQAETDAVV GRHRFLQESD VPRLPYLHAI CKETFRLHPS TPLSLPRVST EPCTVQGYHV
401: PEGTRLLVNI WAIGRDPAVW PEPARFDPGR FMTEEGRKVE PLGSHFELIP FGAGRRICAG ARMGVTLVHH MLGALVHAFD WEVPEGGTAG MDMDEEFGLA
501: LQKKVPLRAV VCPRLAPGAY Q
101: RDHGGSFLDR PADDVAPTVL AYGAQDLVFA PYGPRWRRLR RECSLGLLGP QAVADWADAR RQEVGRMVRA MSRRGGAVEV PEFLFCAMAN IIGQAVVGRR
201: VLDEAGDEEA REFKEMVVEL MTTAGLVNLG DFLPAVAWMD LQGLGRRMRR LSARLDRVWS RLLSEHEAAV ADSDRQHGRQ PDLVDRLIAC RGDARAGEDG
301: VTDLNIKALL NNLFTAGTDT SSSTIEWALA EMLANPAILR RAQAETDAVV GRHRFLQESD VPRLPYLHAI CKETFRLHPS TPLSLPRVST EPCTVQGYHV
401: PEGTRLLVNI WAIGRDPAVW PEPARFDPGR FMTEEGRKVE PLGSHFELIP FGAGRRICAG ARMGVTLVHH MLGALVHAFD WEVPEGGTAG MDMDEEFGLA
501: LQKKVPLRAV VCPRLAPGAY Q
001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N
Arabidopsis Description
CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.