Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- plasma membrane 2
- endoplasmic reticulum 1
- golgi 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G081400.1 | Wheat | extracellular | 50.0 | 81.1 |
| TraesCS6B01G121200.1 | Wheat | plasma membrane, plastid | 47.09 | 48.5 |
| TraesCS6B01G121600.1 | Wheat | vacuole | 47.09 | 48.5 |
| TraesCS6B01G121300.1 | Wheat | extracellular, plasma membrane, vacuole | 27.67 | 36.77 |
| TraesCS7B01G366100.1 | Wheat | vacuole | 37.38 | 34.68 |
| HORVU7Hr1G009700.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 22.33 | 28.05 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G121100.1 | EnsemblPlantsGene:TraesCS6B01G121100 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:+:116112959..116113693
Molecular Weight (calculated)
21946.0 Da
IEP (calculated)
7.016
GRAVY (calculated)
0.726
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEGKICKL AARAAATSPA LVRKAVGALE RSSAARAAAE VLIYQFLSAV FIFSGFLNLV AVEACGGKNC TVASILFELS YHSGMIALLL LAPACVLFFL
101: RAAGSTSDSE VEDEDRSEIF PWPLIWPVLG FITVAASAAP IAFVLQMCGF REASYQVCVA AVLCSALLSA LFYIGAAVAL WRMNPQERSI AGMLRMSLRP
201: SNKVAE
101: RAAGSTSDSE VEDEDRSEIF PWPLIWPVLG FITVAASAAP IAFVLQMCGF REASYQVCVA AVLCSALLSA LFYIGAAVAL WRMNPQERSI AGMLRMSLRP
201: SNKVAE
001: MESSNFSSGV RTESSVKPRG ALIVLEGLDR SGKSTQCAKL LSFLNGLGHP TELWRFPDRE TSVGQMISAY LSNKSQLDDH TIHLLFSANR WEKRSLMEEK
101: LKTGTTLIVD RYSYSGVAFS SAKGLDIEWC KAPEIGLLAP DSVLYLDISP ERAAERGGYG DERYERVEFQ KKVADFYQTL GDSSWKIINA SDAMEEVEKK
201: IQQVVLDQVK ECTEGKPLSL LWSS
101: LKTGTTLIVD RYSYSGVAFS SAKGLDIEWC KAPEIGLLAP DSVLYLDISP ERAAERGGYG DERYERVEFQ KKVADFYQTL GDSSWKIINA SDAMEEVEKK
201: IQQVVLDQVK ECTEGKPLSL LWSS
Arabidopsis Description
ZEU1P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KJ62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.