Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- vacuole 3
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G121200.1 | Wheat | plasma membrane, plastid | 64.0 | 64.0 |
| TraesCS6B01G121100.1 | Wheat | extracellular, plasma membrane, vacuole | 48.5 | 47.09 |
| TraesCS6B01G121300.1 | Wheat | extracellular, plasma membrane, vacuole | 30.0 | 38.71 |
| TraesCS7B01G366100.1 | Wheat | vacuole | 40.0 | 36.04 |
| HORVU7Hr1G009700.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.5 | 33.54 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G121600.1 | EnsemblPlantsGene:TraesCS6B01G121600 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:+:116288384..116289064
Molecular Weight (calculated)
21287.6 Da
IEP (calculated)
8.225
GRAVY (calculated)
1.103
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVTFEEEV SRLAAREAAI SPALVRTAVG ALARSSAARA AAVALFHLFA GTISVLFAAT FLYLVVFRAC VENCTVASVV WEILVYSGML SLLLIVPAMV
101: LFFLRAAGSG SEVKDDVDGC VRWWPLIWHA SVAFFHLALL VGLIGLVLQI CGGSQEVSYL LRTAAVLCKL LLTVAFSIRA AVALWRMHPQ QPAAVGAVVV
101: LFFLRAAGSG SEVKDDVDGC VRWWPLIWHA SVAFFHLALL VGLIGLVLQI CGGSQEVSYL LRTAAVLCKL LLTVAFSIRA AVALWRMHPQ QPAAVGAVVV
001: MGAYETEKPT KDAAALETQS PEDFDQPSPL RKIISVASIA AGVQFGWALQ LSLLTPYVQL LGIPHKWSSL IWLCGPVSGM IVQPIVGFHS DRCRSKFGRR
101: RPFIATGAAL VAVAVFLIGY AADFGYKMGD KLEEKVKVRA IGIFALGFWI LDVANNTLQG PCRAFLADLA AGDAKRTRVA NAFFSFFMAV GNVLGYAAGS
201: YTNLHKMFPF TMTKACDIYC ANLKTCFFLS ITLLLIVTVT SLWYVNDKQW SPPPRNADDD EKTSSVPLFG EIFGAFKVMK RPMWMLLIVT ALNWIAWFPF
301: LLFDTDWMGR EVFGGDSDGN ERSKKLYSLG VQSGAMGLMF NSIVLGFMSL GVEWIGRKLG GAKRLWGIVN FILAAGLAMT VLVTKFAEDH RKTAGDLAGP
401: SASVKAGALS LFAVLGIPLA ITFSTPFALA SIFSSCSGAG QGLSLGVLNL AIVIPQMIVS LGGGPFDALF GGGNLPAFIV AAIAAAISGV LALTVLPSPP
501: PDAPKATTMG GFH
101: RPFIATGAAL VAVAVFLIGY AADFGYKMGD KLEEKVKVRA IGIFALGFWI LDVANNTLQG PCRAFLADLA AGDAKRTRVA NAFFSFFMAV GNVLGYAAGS
201: YTNLHKMFPF TMTKACDIYC ANLKTCFFLS ITLLLIVTVT SLWYVNDKQW SPPPRNADDD EKTSSVPLFG EIFGAFKVMK RPMWMLLIVT ALNWIAWFPF
301: LLFDTDWMGR EVFGGDSDGN ERSKKLYSLG VQSGAMGLMF NSIVLGFMSL GVEWIGRKLG GAKRLWGIVN FILAAGLAMT VLVTKFAEDH RKTAGDLAGP
401: SASVKAGALS LFAVLGIPLA ITFSTPFALA SIFSSCSGAG QGLSLGVLNL AIVIPQMIVS LGGGPFDALF GGGNLPAFIV AAIAAAISGV LALTVLPSPP
501: PDAPKATTMG GFH
Arabidopsis Description
SUC1Sucrose transport protein SUC1 [Source:UniProtKB/Swiss-Prot;Acc:Q39232]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.