Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 |
| PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS6B01G141300 | EnsemblPlants:TraesCS6B01G141300.1 | TIGR:cd10017 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:140597812..140603074
Molecular Weight (calculated)
117320.0 Da
IEP (calculated)
6.478
GRAVY (calculated)
-0.594
Length
1049 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSAQRHFAN PDTDEVYAQM TLQPVNTYAK EALQLSELAL RQARPQMEFF CKTLTASDTS THGGFSVPRR AAEKIFPSLD FSLQPPCQEL QARDIHDNVW
0101: TFRHIFRGQP KRHLLTTGWS LFVSGKKLFA GDSVIFVRDE KQQLLLGIRR ANRQPTNISS SVLSSDSMHI GVLAAAAHAS ANTSPFTIFY NPRASPTEFV
0201: IPFAKYQKAM YSNQISLGMR FRMMCETEEL GTRRYMGTIT GISDLDPVRW KNSQWRSLQV GWDESAAGER RNRVSIWEIE PLAAPFFICP QPFFGVKRPR
0301: QLDDESLEME SLLKRAMPWL GEEVCIKDPQ TQSVTMPGLS LVQWMNMNRQ QSSSLASTAM QSEYYRSASN PAMQNIGAAD LARQLYMQNH LLQQNSMQFN
0401: PPKLHQQMKP INDLSNAALP LNQLGAIRNH QDQKQDQQRQ QQSSIQAIPL SQAQPQTNNV QAQVILQNQM QQQQQQKQPP PSPTQNQHGS SGQHLLQSHQ
0501: LQDQNLQMQQ QQLLLHQQLQ QQQQQQLNKL PGQLANLASQ QTQLSEQELH LQLLQKLQQQ SLMSQSAVTL SRLPIIQEQQ NFLVDMQQQL SNSHSLAQQQ
0601: VMPQQDCRTS SLQTTQLPPP IQQEQQQQKP SQKQVAPTYV SEAAFAQISS TSVIPKTGNT MIVPGAAQSA VTEEIPSCST SPSTANGNHL AQPTIGRNDH
0701: CKVSTEKVPH SIAQMSILTP IEAVSVTPVT TKELPKLNNG VKSSAITSKL PNVVSGLQNF MNNALPTDNL ETASSATSLW PSQTDGLLHQ GFATSNFNQH
0801: QMFKDELPDV EIQGVDPSNS ALFGMNNDGP LGFPMETEGL LENALDSVKY QNHFSTDDEN NYQMQKDARQ EISTSMVSQS FGQSDMAFNS IDSAINDGAL
0901: MNRSSWPPAA PPQRMRTFTK VYKRGAVGRS IDIGRFSGYG ELNQALARMF GIEGQLEDRQ RIGWKLVYTD HEDDVLLLGD DPWEEFVNCV KCIRILSPQE
1001: VQKMSLDGDL GSNVLPNQAC SSSDGGNTWK PRYEQNSGNP SIGPYDQFE
0101: TFRHIFRGQP KRHLLTTGWS LFVSGKKLFA GDSVIFVRDE KQQLLLGIRR ANRQPTNISS SVLSSDSMHI GVLAAAAHAS ANTSPFTIFY NPRASPTEFV
0201: IPFAKYQKAM YSNQISLGMR FRMMCETEEL GTRRYMGTIT GISDLDPVRW KNSQWRSLQV GWDESAAGER RNRVSIWEIE PLAAPFFICP QPFFGVKRPR
0301: QLDDESLEME SLLKRAMPWL GEEVCIKDPQ TQSVTMPGLS LVQWMNMNRQ QSSSLASTAM QSEYYRSASN PAMQNIGAAD LARQLYMQNH LLQQNSMQFN
0401: PPKLHQQMKP INDLSNAALP LNQLGAIRNH QDQKQDQQRQ QQSSIQAIPL SQAQPQTNNV QAQVILQNQM QQQQQQKQPP PSPTQNQHGS SGQHLLQSHQ
0501: LQDQNLQMQQ QQLLLHQQLQ QQQQQQLNKL PGQLANLASQ QTQLSEQELH LQLLQKLQQQ SLMSQSAVTL SRLPIIQEQQ NFLVDMQQQL SNSHSLAQQQ
0601: VMPQQDCRTS SLQTTQLPPP IQQEQQQQKP SQKQVAPTYV SEAAFAQISS TSVIPKTGNT MIVPGAAQSA VTEEIPSCST SPSTANGNHL AQPTIGRNDH
0701: CKVSTEKVPH SIAQMSILTP IEAVSVTPVT TKELPKLNNG VKSSAITSKL PNVVSGLQNF MNNALPTDNL ETASSATSLW PSQTDGLLHQ GFATSNFNQH
0801: QMFKDELPDV EIQGVDPSNS ALFGMNNDGP LGFPMETEGL LENALDSVKY QNHFSTDDEN NYQMQKDARQ EISTSMVSQS FGQSDMAFNS IDSAINDGAL
0901: MNRSSWPPAA PPQRMRTFTK VYKRGAVGRS IDIGRFSGYG ELNQALARMF GIEGQLEDRQ RIGWKLVYTD HEDDVLLLGD DPWEEFVNCV KCIRILSPQE
1001: VQKMSLDGDL GSNVLPNQAC SSSDGGNTWK PRYEQNSGNP SIGPYDQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.