Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G274200.1 | Wheat | cytosol | 29.08 | 47.9 |
| TraesCS2B01G491200.1 | Wheat | cytosol, plasma membrane | 25.51 | 42.02 |
| GSMUA_Achr4P27720_001 | Banana | cytosol | 23.47 | 36.51 |
| TraesCS5B01G155700.1 | Wheat | cytosol | 19.9 | 33.62 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G214000.1 | EnsemblPlantsGene:TraesCS6B01G214000 | Gene3D:3.10.20.90 | InterPro:Atg8-like | InterPro:Ubiquitin-like_domsf | PANTHER:PTHR10969 |
| PANTHER:PTHR10969:SF43 | PFAM:PF02991 | SEG:seg | SUPFAM:SSF54236 | MapMan:19.3.3.1 | : |
Description
No Description!
Coordinates
chr6B:+:289381815..289382405
Molecular Weight (calculated)
21776.8 Da
IEP (calculated)
10.505
GRAVY (calculated)
-0.525
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTCFKTEH PLERRQAESA RIREKYADRI PVIVEKADKS DLPKIDKRYL VPNEMLNPPV RDPSRLNERS STMAGAPFCC CGLKPAPPSF LLCHGSSRLP
101: HKHGMSPRPT STRPLSPVRP CHCLCYPMAA HCPEPRHGRA SPPLAGPPPS TSSAWLVRLC LGHRPQPCLA YRASPRHRLP GRPAPACRRL TPLVLL
101: HKHGMSPRPT STRPLSPVRP CHCLCYPMAA HCPEPRHGRA SPPLAGPPPS TSSAWLVRLC LGHRPQPCLA YRASPRHRLP GRPAPACRRL TPLVLL
001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P
101: DDDGFLYVTY SGENTFGFGS P
Arabidopsis Description
ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.