Factsheet for TraesCS6D01G001300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G408300.1	Wheat	plasma membrane	46.63	48.95
TraesCSU01G224100.1	Wheat	extracellular	45.14	48.01
TraesCS3D01G083900.1	Wheat	mitochondrion	31.92	34.04
TraesCS3D01G518600.1	Wheat	plasma membrane	38.9	29.83
TraesCS6D01G010800.1	Wheat	plasma membrane	46.88	25.3
TraesCS6D01G395900.1	Wheat	plasma membrane	45.39	24.56
TraesCS6D01G063400.1	Wheat	plasma membrane	43.39	23.9
TraesCS6D01G395600.1	Wheat	plasma membrane	43.39	23.39
TraesCS6D01G395400.1	Wheat	plasma membrane	43.64	23.27
TraesCS6D01G395700.1	Wheat	plasma membrane	43.14	23.22
TraesCS6D01G002300.1	Wheat	cytosol, plasma membrane, plastid	26.93	22.36
TraesCS6D01G069500.1	Wheat	plasma membrane	39.9	21.3
TraesCS1D01G010100.1	Wheat	cytosol	38.65	19.77
TraesCS6D01G395800.1	Wheat	plasma membrane	22.69	19.44
TraesCS6D01G001400.1	Wheat	plasma membrane	33.17	18.87
TraesCS4D01G042300.1	Wheat	plasma membrane	33.67	17.56
TraesCS3D01G538300.1	Wheat	vacuole	30.92	17.27
TraesCS2D01G002600.2	Wheat	plasma membrane	32.67	17.24
TraesCS7D01G545900.1	Wheat	plasma membrane	31.17	17.08
TraesCS1D01G016800.1	Wheat	plasma membrane	28.18	16.57
TraesCS1D01G058800.1	Wheat	plasma membrane	26.93	15.81
TraesCS1D01G059500.1	Wheat	plasma membrane	26.93	15.77
TraesCS4D01G042500.1	Wheat	peroxisome	14.46	14.8
TraesCS1D01G014900.1	Wheat	plasma membrane	25.19	14.79
TraesCS5D01G477400.1	Wheat	plasma membrane	25.19	14.33
TraesCS2D01G070700.1	Wheat	plasma membrane	25.69	14.31
TraesCS2D01G070800.1	Wheat	plasma membrane	25.44	14.19
TraesCS2D01G070600.1	Wheat	plasma membrane	23.19	12.74
TraesCS1D01G005100.1	Wheat	plasma membrane	9.48	10.83
TraesCS2D01G120300.1	Wheat	cytosol	4.24	4.53
TraesCS1D01G200500.1	Wheat	cytosol, mitochondrion	5.49	4.35
GSMUA_Achr9P20680_001	Banana	cytosol	1.0	4.26
TraesCS6D01G000100.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G016300.1	Wheat	cytosol	0.0	0.0
TraesCS2D01G132000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.10.25.10	MapMan:35.1	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF-like_dom	InterPro:EGF-type_Asp/Asn_hydroxyl_site	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0030246	GO:GO:0030247	InterPro:IPR000742	PFAM:PF13947
ScanProsite:PS00010	PFscan:PS50026	PANTHER:PTHR27005	PANTHER:PTHR27005:SF26	SMART:SM00179	SMART:SM00181
SUPFAM:SSF57196	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G001300	EnsemblPlants:TraesCS6D01G001300.1	InterPro:WAK_GUB
TIGR:cd00054	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:500446..502835

Molecular Weight (calculated)

43921.3 Da

IEP (calculated)

7.308

GRAVY (calculated)

-0.210

Length

401 amino acids

Sequence
(BLAST)

001: MATSSSQFLF RMLLPVLLVV ILASAAEGQR PGCREKCGNI TIPFPFGIGL RCFREGFEVL CNHSRAFLAG NRTRKGDSEG KLAWSWSLME LASISVATSD
101: ARAYAAVSYR CSMSENTSSS LSLRMDFAMS SKRNVLQGVG WIVDAQLSYE PYFSAAADGF PCSVPESNYL DRPAGTNGSC VAPFPPDNGP NEIISLSVQG
201: NDKNRWWETY PCSYGMLVEE SVYSFSTPDI RGNMTLLERY PQGTPFILDF AAGNTNSCPD EGRLPSDYAC VSGNSSCANA TTRTRDFPTT RTTITRGYVC
301: KCWEHYDGNP YIPNGCQYID ECKLPTNPCP NGGICKNRLD GYDCPCKFGM KDDGKGGTCT DVFPPASKAA VGAIGGILLM VIISFLIILY KEKKMKEFYK
401: K

Best Arabidopsis Sequence Match ( AT1G21240.1 )
(BLAST)

001: MKFQEGVFLV VIFFLAYTQL VKGQHQPRED CKLKCGNVTI EYPFGISTGC YYPGDDNFNL TCVVEEKLLL FGIIQVTNIS HSGHVSVLFE RFSECYEQKN
101: ETNGTALGYQ LGSSFSLSSN NKFTLVGCNA LSLLSTFGKQ NYSTGCLSLC NSQPEANGRC NGVGCCTTED FSVPFDSDTF QFGSVRLRNQ VNNSLDLFNT
201: SVYQFNPCTY AFLVEDGKFN FDSSKDLKNL RNVTRFPVAL DWSIGNQTCE QAGSTRICGK NSSCYNSTTR NGYICKCNEG YDGNPYRSEG CKDIDECISD
301: THNCSDPKTC RNRDGGFDCK CPSGYDLNSS MSCTRPEYKR TRIFLVIIIG VLVLLLAAIC IQHATKQRKY TKLRRQFFEQ NGGGMLIQRL SGAGLSNIDF
401: KIFTEEGMKE ATNGYDESRI LGQGGQGTVY KGILPDNTIV AIKKARLADS RQVDQFIHEV LVLSQINHRN VVKILGCCLE TEVPLLVYEF ITNGTLFDHL
501: HGSIFDSSLT WEHRLRIAIE VAGTLAYLHS SASIPIIHRD IKTANILLDE NLTAKVADFG ASKLIPMDKE QLTTMVQGTL GYLDPEYYTT GLLNEKSDVY
601: SFGVVLMELL SGQKALCFER PQASKHLVSY FVSATEENRL HEIIDDQVLN EDNLKEIQEA ARIAAECTRL MGEERPRMKE VAAKLEALRV EKTKHKWSDQ
701: YPEENEHLIG GHILSAQGET SSSIGYDSIK NVAILDIETG R

Arabidopsis Description

WAK3Wall-associated receptor kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMN8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.