Factsheet for TraesCS7A01G024100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G020100.1	Wheat	cytosol, plastid	65.77	88.29
TraesCS7A01G024200.1	Wheat	plastid	76.51	51.35
TraesCS2A01G424800.1	Wheat	extracellular	53.69	48.78
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	48.32	46.45
VIT_03s0017g02260.t01	Wine grape	extracellular	48.32	36.92
VIT_03s0017g02200.t01	Wine grape	extracellular	44.97	32.06
CDY06505	Canola	extracellular	40.27	28.85
HORVU2Hr1G099370.2	Barley	mitochondrion	51.68	28.52
CDY22735	Canola	extracellular	44.97	28.39
CDY59805	Canola	extracellular	44.97	28.39
CDY47794	Canola	extracellular	41.61	27.93
Bra001852.1-P	Field mustard	extracellular	47.65	27.2
AT4G15160.1	Thale cress	extracellular	47.65	25.82
Bra038089.1-P	Field mustard	extracellular	44.3	25.78
Bra023850.1-P	Field mustard	extracellular	39.6	25.65
CDY09061	Canola	extracellular	43.62	25.39
CDY22936	Canola	plasma membrane	48.99	25.09
Bra039563.1-P	Field mustard	plasma membrane	47.65	24.4
Bra037084.1-P	Field mustard	extracellular	42.28	24.14
CDY19310	Canola	extracellular	43.62	24.07
CDY39502	Canola	extracellular	42.95	23.7
KRG90032	Soybean	extracellular	47.65	21.65
TraesCS7A01G520100.1	Wheat	extracellular	42.95	20.91
Bra031329.1-P	Field mustard	extracellular	46.98	20.59
AT3G22120.2	Thale cress	plastid	48.32	20.51
TraesCS2A01G518100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	38.93	19.86
PGSC0003DMT400035207	Potato	extracellular	51.01	19.49
KRH17654	Soybean	extracellular	46.98	18.23
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	45.64	4.59

Protein Annotations

EnsemblPlants:TraesCS7A01G024100.1	EnsemblPlantsGene:TraesCS7A01G024100	Gene3D:1.10.110.10	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Hydrophob_seed
PANTHER:PTHR31731	PANTHER:PTHR31731:SF16	PFAM:PF14547	SEG:seg	SMART:SM00499	SUPFAM:SSF47699
TIGR:cd01958	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:9570457..9579286

Molecular Weight (calculated)

15102.9 Da

IEP (calculated)

7.982

GRAVY (calculated)

0.425

Length

149 amino acids

Sequence
(BLAST)

001: MIPPSPTLVT PMPAPTPASP TPIPVAPTPT LVMPPAPTPV TPTPPPAPAP APATSTAPAT STGKCPVDTL KLLACVDVLN GLLHAVIGSS ARNTCCPLLS
101: GVADLDAALC LCTTIKVKAL NINLMLPIAI EVLVNQCGKR VPKDFHCPN

Best Arabidopsis Sequence Match ( AT3G22120.2 )
(BLAST)

001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A

Arabidopsis Description

CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.