Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G135100.1 | Wheat | nucleus | 94.86 | 64.57 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 92.47 | 62.94 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 89.04 | 60.47 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 87.33 | 59.58 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 85.96 | 58.37 |
| TraesCS7A01G135600.1 | Wheat | cytosol | 42.47 | 58.22 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 71.58 | 48.72 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 35.96 | 48.61 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 49.32 | 41.14 |
| Zm00001d006791_P001 | Maize | nucleus | 18.84 | 35.95 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 20.89 | 33.7 |
| Zm00001d050594_P001 | Maize | nucleus | 24.32 | 33.65 |
| KXG21281 | Sorghum | nucleus | 19.86 | 33.53 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 29.79 | 31.75 |
| Zm00001d024809_P001 | Maize | nucleus | 28.77 | 29.37 |
| EES18996 | Sorghum | nucleus | 28.77 | 29.17 |
| EES18995 | Sorghum | nucleus | 27.4 | 28.99 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 24.66 | 27.91 |
| EER89573 | Sorghum | nucleus | 29.45 | 27.22 |
| EER89299 | Sorghum | nucleus | 27.74 | 26.47 |
| EER88198 | Sorghum | nucleus | 28.77 | 26.42 |
| OQU76057 | Sorghum | nucleus | 27.74 | 26.38 |
| EER88196 | Sorghum | nucleus | 28.08 | 25.95 |
| Zm00001d045162_P001 | Maize | nucleus | 25.68 | 25.86 |
| KXG21283 | Sorghum | nucleus | 21.23 | 25.41 |
| Zm00001d024814_P001 | Maize | nucleus | 24.32 | 25.27 |
| Zm00001d010889_P001 | Maize | plastid | 20.55 | 24.9 |
| EER89387 | Sorghum | nucleus | 26.03 | 23.9 |
| OQU77390 | Sorghum | nucleus | 19.86 | 23.77 |
| EER94504 | Sorghum | nucleus | 22.6 | 22.92 |
| KXG21280 | Sorghum | nucleus | 27.74 | 22.75 |
| EES18997 | Sorghum | nucleus | 26.37 | 20.48 |
| Os06t0173800-00 | Rice | vacuole | 22.6 | 20.18 |
| OQU77389 | Sorghum | nucleus | 22.95 | 20.06 |
| Zm00001d024810_P001 | Maize | nucleus | 26.03 | 19.49 |
| KXG21278 | Sorghum | nucleus | 22.6 | 19.19 |
| PGSC0003DMT400086891 | Potato | nucleus | 10.96 | 14.81 |
| Solyc02g082380.1.1 | Tomato | nucleus | 10.96 | 14.41 |
| Solyc02g082390.1.1 | Tomato | nucleus | 11.64 | 12.1 |
| PGSC0003DMT400091980 | Potato | nucleus | 11.3 | 8.19 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G135300.1 | EnsemblPlantsGene:TraesCS7A01G135300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR44042 | PANTHER:PTHR44042:SF3 |
| SUPFAM:SSF46689 | TIGR:cd00167 | TIGRFAMs:TIGR01557 | MapMan:15.5.2.2 | : | : |
Description
No Description!
Coordinates
chr7A:-:88175722..88177816
Molecular Weight (calculated)
32608.2 Da
IEP (calculated)
6.739
GRAVY (calculated)
-0.543
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPIVNQGWT SSEVEEACSL IARINTNKIM YDSNDDKNKK HNYIVNSLHA LFPSKTMKQV TDLYIDLAVE MHMTQWREGT HVTSGSAQNI FTFCDPVNGN
101: YELPMEENGA SSTHGIYTMG DHANENFGVL PVNKQKSFLY GLEVYGRGDW KNISKHFVTT KTPVQVSSHA QKFFKRIQKK ASSGTKHYSI NDVRLHDNEL
201: LAENNSSVTR QALSFTGLNN DPSFKLQAPT SSSIVMNNQA QCSPSIYNQQ VGHQPMWSEQ QMMGSIAAVM DGVGNYVPDG QQGSAYFYLG NV
101: YELPMEENGA SSTHGIYTMG DHANENFGVL PVNKQKSFLY GLEVYGRGDW KNISKHFVTT KTPVQVSSHA QKFFKRIQKK ASSGTKHYSI NDVRLHDNEL
201: LAENNSSVTR QALSFTGLNN DPSFKLQAPT SSSIVMNNQA QCSPSIYNQQ VGHQPMWSEQ QMMGSIAAVM DGVGNYVPDG QQGSAYFYLG NV
001: MASSQWTRSE DKMFEQALVL FPEGSPNRWE RIADQLHKSA GEVREHYEVL VHDVFEIDSG RVDVPDYMDD SAAAAAGWDS AGQISFGSKH GESERKRGTP
101: WTENEHKLFL IGLKRYGKGD WRSISRNVVV TRTPTQVASH AQKYFLRQNS VKKERKRSSI HDITTVDATL AMPGSNMDWT GQHGSPVQAP QQQQIMSEFG
201: QQLNPGHFED FGFRM
101: WTENEHKLFL IGLKRYGKGD WRSISRNVVV TRTPTQVASH AQKYFLRQNS VKKERKRSSI HDITTVDATL AMPGSNMDWT GQHGSPVQAP QQQQIMSEFG
201: QQLNPGHFED FGFRM
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ21]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.