Factsheet for TraesCS7A01G188800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G093600.1	Wheat	nucleus	83.98	84.44
TraesCS7D01G189800.2	Wheat	nucleus	87.85	80.3
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	61.88	54.63
Zm00001d050594_P001	Maize	nucleus	31.49	27.01
TraesCS7A01G120900.1	Wheat	nucleus	38.12	26.74
Zm00001d006791_P001	Maize	nucleus	21.55	25.49
KXG21281	Sorghum	nucleus	23.76	24.86
TraesCS7A01G121100.1	Wheat	nucleus	37.02	24.45
KXG21283	Sorghum	nucleus	31.49	23.36
Zm00001d010889_P001	Maize	plastid	30.39	22.82
TraesCS1A01G357600.1	Wheat	nucleus	42.54	22.0
EES18995	Sorghum	nucleus	32.6	21.38
Zm00001d024809_P001	Maize	nucleus	33.7	21.33
OQU77390	Sorghum	nucleus	28.73	21.31
TraesCS7A01G135300.1	Wheat	nucleus	33.7	20.89
EES18996	Sorghum	nucleus	33.15	20.83
EER94504	Sorghum	nucleus	32.04	20.14
OQU76057	Sorghum	nucleus	33.15	19.54
EER88198	Sorghum	nucleus	32.6	18.55
EER88196	Sorghum	nucleus	32.04	18.35
EER89573	Sorghum	nucleus	32.04	18.35
Zm00001d045162_P001	Maize	nucleus	28.18	17.59
EER89299	Sorghum	nucleus	29.28	17.32
TraesCS7A01G135200.1	Wheat	nucleus	40.88	17.25
TraesCS7A01G135000.1	Wheat	nucleus	40.33	17.02
TraesCS7A01G135100.1	Wheat	nucleus	40.33	17.02
TraesCS7A01G135400.1	Wheat	nucleus	40.33	16.98
EER89387	Sorghum	nucleus	28.73	16.35
Solyc02g082380.1.1	Tomato	nucleus	19.89	16.22
OQU77389	Sorghum	nucleus	29.83	16.17
Zm00001d024814_P001	Maize	nucleus	24.86	16.01
KXG21278	Sorghum	nucleus	30.39	15.99
PGSC0003DMT400086891	Potato	nucleus	18.78	15.74
Zm00001d024810_P001	Maize	nucleus	33.7	15.64
KXG21280	Sorghum	nucleus	29.83	15.17
EES18997	Sorghum	nucleus	28.73	13.83
Solyc02g082390.1.1	Tomato	nucleus	20.44	13.17
Os06t0173800-00	Rice	vacuole	22.65	12.54
TraesCS7A01G135600.1	Wheat	cytosol	14.36	12.21
PGSC0003DMT400091980	Potato	nucleus	19.34	8.68

Protein Annotations

EnsemblPlants:TraesCS7A01G188800.1	EnsemblPlantsGene:TraesCS7A01G188800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR44042	SUPFAM:SSF46689
TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:	:

Description

No Description!

Coordinates

chr7A:-:145032418..145034088

Molecular Weight (calculated)

20756.7 Da

IEP (calculated)

9.088

GRAVY (calculated)

-0.786

Length

181 amino acids

Sequence
(BLAST)

001: MKARVEVEDP DPVITGFNNN DRSCDGINHD KNEKPASLEL RLWWPCETMQ QEGTPVMEEG KQATMSVGNK VKVPENGMSI HQPVIVPRTR KLFLRGLGVY
101: GRGKWKEISK DFVTTKTPVQ VSSHAQKYFR RIKKGELERQ RYSINDLELK IVKPWTIGNN SSAYQSLIFD DADNQNQSFD M

Best Arabidopsis Sequence Match ( AT5G08520.1 )
(BLAST)

001: MTVEEVSDGS VWSREDDIAF ERALANNTDE SEERWEKIAA DVPGKSVEQI KEHYELLVED VTRIESGCVP LPAYGSPEGS NGHAGDEGAS SKKGGNSHAG
101: ESNQAGKSKS DQERRKGIAW TEDEHRLFLL GLDKYGKGDW RSISRNFVVT RTPTQVASHA QKYFIRLNSM NKDRRRSSIH DITSVGNADV STPQGPITGQ
201: NNSNNNNNNN NNNSSPAVAG GGNKSAKQAV SQAPPGPPMY GTPAIGQPAV GTPVNLPAPP HMAYGVHAAP VPGSVVPGAA MNIGQMPYTM PRTPTAHR

Arabidopsis Description

SRM1Transcription factor SRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.