Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G215500.1 | Wheat | cytosol, nucleus, plastid | 99.68 | 99.68 |
TraesCS7A01G213600.1 | Wheat | plastid | 13.92 | 5.98 |
Protein Annotations
EnsemblPlants:TraesCS7A01G213500.1 | EnsemblPlantsGene:TraesCS7A01G213500 | ncoils:Coil | PANTHER:PTHR35502 | PANTHER:PTHR35502:SF2 | SEG:seg |
MapMan:23.6.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:177323617..177326551
Molecular Weight (calculated)
33872.7 Da
IEP (calculated)
4.621
GRAVY (calculated)
-0.644
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDRSLRPAE AGAGAAGPGE VRGNVDRVLF KDLVDMVPLV ESLMDRRTNP SYSRRASLVY TPAPAKKGGD LKSAKTPQTL SAKKRRDPGD TGNKSTPDSN
101: GENGSVAPMT QSGAENKPKD KDEIGLLREQ VDELQKQLVE KEEALRSAES TVSEMNAVYS TVDGLKRQVA EKEALIKYAN SQLQNAKIML ADKQASLEKL
201: EWEVKTSNKK VEDLQGDVSN MEFEISSFVT LFEKISENVS DDCHDGSIPS YDLEALQSVS EIDKIEVDKI EQERVTYAEA LAAARANPNE EQLSSVAEAR
301: SRLQVLVVQ
101: GENGSVAPMT QSGAENKPKD KDEIGLLREQ VDELQKQLVE KEEALRSAES TVSEMNAVYS TVDGLKRQVA EKEALIKYAN SQLQNAKIML ADKQASLEKL
201: EWEVKTSNKK VEDLQGDVSN MEFEISSFVT LFEKISENVS DDCHDGSIPS YDLEALQSVS EIDKIEVDKI EQERVTYAEA LAAARANPNE EQLSSVAEAR
301: SRLQVLVVQ
001: MYEQQQHFMD LQSDSGFGDD SSWLAGDDDL RLSPHQSAAG TNSGNENLDR RLLKDLVEMV PLIEHYMEHK ERSSFKRRGS MIYTKMPSKE SLSRRGRNAS
101: QTVPGRKKRD QEGNDDVMNN SREDDENAKA LAGAEKEEMS RLREQVNDLQ TKLSEKEEVL KSMEMSKNQV NEIQEKLEAT NRLVAEKDML IKSMQLQLSD
201: TKIKLADKQA ALEKTQWEAK TTGTRAIKLQ EQLDAVEGDI STFTRVFETL AKTDSKKPDR DYDAVPYEFD HLPYLDDVDE TDLRKMEEAR LAYVAAVNTA
301: KEREDEESLV MAAQARAYLQ SLAFTY
101: QTVPGRKKRD QEGNDDVMNN SREDDENAKA LAGAEKEEMS RLREQVNDLQ TKLSEKEEVL KSMEMSKNQV NEIQEKLEAT NRLVAEKDML IKSMQLQLSD
201: TKIKLADKQA ALEKTQWEAK TTGTRAIKLQ EQLDAVEGDI STFTRVFETL AKTDSKKPDR DYDAVPYEFD HLPYLDDVDE TDLRKMEEAR LAYVAAVNTA
301: KEREDEESLV MAAQARAYLQ SLAFTY
Arabidopsis Description
MPB2CMPB2C [Source:UniProtKB/TrEMBL;Acc:A0A178UL06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.