Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| Gene3D:1.10.600.10 | MapMan:9.1.6.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004310 | GO:GO:0006629 |
| GO:GO:0006696 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0016765 | GO:GO:0051996 | InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF00494 | ScanProsite:PS01044 |
| ScanProsite:PS01045 | PANTHER:PTHR31480 | PANTHER:PTHR31480:SF2 | SUPFAM:SSF48576 | InterPro:Squ/phyt_synthse | InterPro:Squalene/phytoene_synthase_CS |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7A01G557300 | EnsemblPlants:TraesCS7A01G557300.1 | InterPro:Trans_IPPS_HH | TIGR:cd00683 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:729397558..729400668
Molecular Weight (calculated)
32420.0 Da
IEP (calculated)
8.571
GRAVY (calculated)
-0.406
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MELTRSCLVV HGRDLADDRG AAARHMGHLR RTDELVDGPN ASHITPQALD RWERRLEDLF AGRPYDMLDA ALSDTITKFP IDIQPFKDMI DGMRTDLKKA
101: RYKNFDELYM YCYYVAGTVG LMSVPVMGIA PDSKATAESV YGAALALGLA NQLTNILRDV GEDARRGRIY LPQDELAEAG LSDEDIFKGV VTDKWRKFMK
201: RQIKRARMFF EEAERGVTEL RKESRWPVWA SLLLYRQILD EIEANDYNNF TKRAYVGKAK KVLALPVAYG RSLLLPYSLR NNQT
101: RYKNFDELYM YCYYVAGTVG LMSVPVMGIA PDSKATAESV YGAALALGLA NQLTNILRDV GEDARRGRIY LPQDELAEAG LSDEDIFKGV VTDKWRKFMK
201: RQIKRARMFF EEAERGVTEL RKESRWPVWA SLLLYRQILD EIEANDYNNF TKRAYVGKAK KVLALPVAYG RSLLLPYSLR NNQT
001: MSSSVAVLWV ATSSLNPDPM NNCGLVRVLE SSRLFSPCQN QRLNKGKKKQ IPTWSSSFVR NRSRRIGVVS SSLVASPSGE IALSSEEKVY NVVLKQAALV
101: NKQLRSSSYD LDVKKPQDVV LPGSLSLLGE AYDRCGEVCA EYAKTFYLGT LLMTPERRKA IWAIYVWCRR TDELVDGPNA SHITPMALDR WEARLEDLFR
201: GRPFDMLDAA LADTVARYPV DIQPFRDMIE GMRMDLKKSR YQNFDDLYLY CYYVAGTVGL MSVPVMGIDP KSKATTESVY NAALALGIAN QLTNILRDVG
301: EDARRGRVYL PQDELAQAGL SDEDIFAGKV TDKWRNFMKM QLKRARMFFD EAEKGVTELS AASRWPVWAS LLLYRRILDE IEANDYNNFT KRAYVGKVKK
401: IAALPLAYAK SVLKTSSSRL SI
101: NKQLRSSSYD LDVKKPQDVV LPGSLSLLGE AYDRCGEVCA EYAKTFYLGT LLMTPERRKA IWAIYVWCRR TDELVDGPNA SHITPMALDR WEARLEDLFR
201: GRPFDMLDAA LADTVARYPV DIQPFRDMIE GMRMDLKKSR YQNFDDLYLY CYYVAGTVGL MSVPVMGIDP KSKATTESVY NAALALGIAN QLTNILRDVG
301: EDARRGRVYL PQDELAQAGL SDEDIFAGKV TDKWRNFMKM QLKRARMFFD EAEKGVTELS AASRWPVWAS LLLYRRILDE IEANDYNNFT KRAYVGKVKK
401: IAALPLAYAK SVLKTSSSRL SI
Arabidopsis Description
PSYPHYTOENE SYNTHASE [Source:UniProtKB/TrEMBL;Acc:F4KGX7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.