Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| EnsemblPlants:TraesCS7B01G010000.1 | EnsemblPlantsGene:TraesCS7B01G010000 | ncoils:Coil | PANTHER:PTHR31315 | PANTHER:PTHR31315:SF2 | SEG:seg |
| MapMan:19.2.2.1.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:6150092..6153783
Molecular Weight (calculated)
44878.5 Da
IEP (calculated)
4.645
GRAVY (calculated)
-0.469
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNRVGGRRR RSPVDERYTA PQGLYPHPDI DLKKLRRLIL EAKLAPCHPG ADDPRPDLDE CPICFLFYPS LNRSKCCAKG ICTECFLQMK SPTSCRPTQC
101: PYCKMLNYAV EYRGVKTKEE KGVEQIEEQR VIEAQIRMRH QELQDDAERL KNKQVAASTD EVTIAQVEPC DTGGTSTPAA SGAQGNDAVS GQVQHSELLL
201: KNAERLRQLR DNNFDMDLEE VMLMEAIWLS VQDQEALGNP GSIGAVPPTL PPRCYDASGA ASAEAAPPGG FACAVAALAE QQHMLGDPSS AATCQTSRHD
301: ILSRSQRSFT EDLSIAGSSS SATRVEEPPN GRTPQSRDGA DYSNNDGWSE AAEASTSCAG SDITVEAGAA SLAAAASDVS SIGSGNVPDS FEEQMMLAMA
401: LSLVDARGVG GSPPGLAWR
101: PYCKMLNYAV EYRGVKTKEE KGVEQIEEQR VIEAQIRMRH QELQDDAERL KNKQVAASTD EVTIAQVEPC DTGGTSTPAA SGAQGNDAVS GQVQHSELLL
201: KNAERLRQLR DNNFDMDLEE VMLMEAIWLS VQDQEALGNP GSIGAVPPTL PPRCYDASGA ASAEAAPPGG FACAVAALAE QQHMLGDPSS AATCQTSRHD
301: ILSRSQRSFT EDLSIAGSSS SATRVEEPPN GRTPQSRDGA DYSNNDGWSE AAEASTSCAG SDITVEAGAA SLAAAASDVS SIGSGNVPDS FEEQMMLAMA
401: LSLVDARGVG GSPPGLAWR
001: MGNKLGRKRQ VVEERYTKPQ GLYVNKDVDV KKLRKLIVES KLAPCYPGDD ESCHDLEECP ICFLYYPSLN RSRCCMKSIC TECFLQMKNP NSARPTQCPF
101: CKTPNYAVEY RGVKSKEEKG IEQVEEQRVI EAKIRMRQKE MQDDEEKMQK RLESCSSSTS AMTGEMEYGS TSAISYNSLM DDGEIAPSQN ASVVRQHSRP
201: RGNREDEVDV DLEELMVMEA IWLSVQETGT QRNSASGEIT SSRQYVTDNH SYVSSPPRVT PIVEPATPSS SSGGLSCAIS ALAERQMVGE SSSHNHNHNV
301: NVSSYSMLPG NCDSYYDIEQ EVDGIDNHHH HRHHYEMGET GSSNSYVSSY MTGEGFHNFP PPPPLVIVPE SFEEQMMMAM AVSMAEVHAT TTCAPTEVTW
401: Q
101: CKTPNYAVEY RGVKSKEEKG IEQVEEQRVI EAKIRMRQKE MQDDEEKMQK RLESCSSSTS AMTGEMEYGS TSAISYNSLM DDGEIAPSQN ASVVRQHSRP
201: RGNREDEVDV DLEELMVMEA IWLSVQETGT QRNSASGEIT SSRQYVTDNH SYVSSPPRVT PIVEPATPSS SSGGLSCAIS ALAERQMVGE SSSHNHNHNV
301: NVSSYSMLPG NCDSYYDIEQ EVDGIDNHHH HRHHYEMGET GSSNSYVSSY MTGEGFHNFP PPPPLVIVPE SFEEQMMMAM AVSMAEVHAT TTCAPTEVTW
401: Q
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93YV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.