Subcellular Localization
min:
: max
Winner_takes_all: plastid, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G153000.1 | Wheat | cytosol, plasma membrane, plastid | 97.4 | 97.5 |
| TraesCS7A01G151100.1 | Wheat | plastid | 96.94 | 96.94 |
| HORVU7Hr1G031100.1 | Barley | cytosol | 95.82 | 95.87 |
| Os10t0154600-01 | Rice | peroxisome, plasma membrane, plastid | 26.02 | 79.1 |
| OQU82713 | Sorghum | plastid | 71.03 | 71.14 |
| Zm00001d030340_P037 | Maize | plasma membrane | 62.27 | 68.06 |
| Zm00001d030342_P001 | Maize | plastid | 4.74 | 65.03 |
| GSMUA_Achr11P... | Banana | cytosol | 14.71 | 50.7 |
| VIT_03s0038g01880.t01 | Wine grape | cytosol | 10.44 | 44.09 |
| Solyc11g039890.1.1 | Tomato | cytosol | 3.72 | 43.71 |
| PGSC0003DMT400056702 | Potato | endoplasmic reticulum, extracellular, plastid | 1.48 | 43.28 |
| Solyc11g039880.1.1 | Tomato | nucleus | 15.43 | 40.84 |
| VIT_03s0038g01920.t01 | Wine grape | plasma membrane | 26.27 | 38.74 |
| KRH24149 | Soybean | nucleus | 37.22 | 37.18 |
| AT4G38760.1 | Thale cress | cytosol | 36.97 | 36.95 |
| GSMUA_Achr11P... | Banana | plasma membrane | 24.85 | 36.75 |
| CDX72740 | Canola | cytosol | 36.76 | 36.67 |
| CDY22413 | Canola | cytosol | 32.79 | 36.63 |
| Bra033575.1-P | Field mustard | cytosol | 36.51 | 36.01 |
| VIT_03s0038g01870.t01 | Wine grape | cytosol | 1.99 | 35.78 |
| KRH29119 | Soybean | mitochondrion | 7.89 | 35.31 |
| Solyc11g039870.1.1 | Tomato | nucleus | 17.11 | 30.49 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G055100.1 | EnsemblPlantsGene:TraesCS7B01G055100 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0017056 | InterPro:Nucleoporin_Nup188 |
| ncoils:Coil | PANTHER:PTHR31431 | PFAM:PF10487 | SEG:seg | MapMan:23.5.1.1.2.2 | : |
Description
No Description!
Coordinates
chr7B:+:58537768..58544914
Molecular Weight (calculated)
216600.0 Da
IEP (calculated)
5.858
GRAVY (calculated)
0.155
Length
1964 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASGGAPAST SGGGGAGTKT VSASLWWDPF VALCDDLDRA AASPSAAVSD ALAERIKGHH AWLRGAVSMF GKPNGASRAA LDAGQVAVGE HRLAVKPDLK
0101: EAALRASKSL DLDEVQSYIL VKRSSESAPT TRDADPQELL RLVSLQYYLE RQCLLKCIRR IFVHATCTDD DSGSTDAIKQ EASLLGSDEM EQRLLSIIKD
0201: SLAAAFSVKS AADLTVSWLE ESLIEINLIL DILFLAICDN FSRCNGGLWI ALCSLFRDML SGSYDVGKFA VSAEAKRSFH YAKAQLLFIL VETLDLENLL
0301: RMVHDEVSFS GGYSQYSVAD ILEMDIEVSR LPEFEVESGP LLLAWAVFHC LLLSLPGNNA NLEIDHASYA QQAFELAPFN YLLGVLCSSI FRESDGPVSG
0401: FRAVLRSFIS AFIASYEISY QTEDSSLGVI LNIICEVYGG EESLCMQFWD KDSCVDGPIR SVLQMLEKEY PFQITDLLRF LSAVSYGTWP AQCVYNYLER
0501: MNGLTTLYAT PGSVPDSLNY CDQIEIHHPI SIPGMEGITL PRGTRGYILR SLEGNAALVR WEFPHSGVFI LLLTLAQDLY SCNYVEACDI MDLLYQMVSS
0601: NQVLCSALLH ADKSLAVQKS KSLGQIGEYI RIDIVKILCS SVFKYEQDGN NASIMSKTFS VLTEFLKCVP YHVFDVALEC GIFSSQLNDP SSDWLLSGAL
0701: ARMLFAASEE NGDCSSLTTS LLDFAIQVLR KAAAADDMIS PFIVFSVQYI MVNHMNWKHK KYSRWKTTLK VFELVKSCIQ VKPFLSKLGG IIWQMLLYDS
0801: SIHNVLWHNV CTSMQLLESR GSFSNGVEDI EDIQLVLCCG LDIIFFMLSN LPEDLMPVAP FVTLVLSSSL KPLPFITATI SSMSFQNSAL QVSAARALSV
0901: LCFTAHRVQP QLMENGSFLV DGSEIWKLQA SISQILDKED DTNNCLIVAI FSLLTSVARY QPALFVSLTE ENAMIQADHS NSANSQTNGS STLNSSRSNS
1001: RLVEQMLGYI ENSTEFMNSS PSLLLSILDL LEALWESGVQ FICILDKLRS SRTFWESLSC CIRATFDHCP VDSVDTVDEK FSSRYNCQAK IFKIMSHELF
1101: LKGRLLVEAK TSNPVADGTK GQKEPSASYP SNVVCKWFDS ALLEDFINHL SSNGYQKDLF HRAKVASCVC IIRLITKLSS GDTASLSFSA VKKIQLISSK
1201: LLQHRAFIAL LSQYALHGYS GEQELTSLVI NDLYYHIHGE LEGRQITPGP FQELLCFLLE FKFFECNATE QPHSAFPAVS GNVLFDVAHT RDDLGVKFWN
1301: HSDWKPCKEV AEKMLDIMHK ANLMKCHADA KLCTLRSFIT FLSVYTGTSS SNELTLPDGG ISATAMESAI RCACKYLQST VDSLFPEVDT NEVLFPLLSG
1401: QVDLLLTLTR FSFHQAKQTK SYVHLYPVIV LLMRTSGAST SFLVDLVPSS PALRKPVKSL LVLILSLFEF IYGKDAVKDG SGDANLFGES SIISTRLLPV
1501: LCKLAENREY SDLAVGSMDL LLKGFIPPNV WLPILQKHFR LQAILHKCQN GAILSTQVIL NFLLTLGRTK DGAKMLQSAN IFAFLKVLLS KLSLDDSCFR
1601: NSLSSQAKDV HMWSLALAIV ASLNHCMDDD VSRSSVANGT VSFLSGQVPL MSAYLSAQSV NTHQNKKRAV LQQSQTSLSA LSLTENILSL LCVLAKYHFP
1701: RDTGMMQVDS ELREIIIHLL AFISRGSART GDSPNWNPSF FCPPIAKEEV VLHEDPPLIR SKHGWFRLAA SSSLSTAAIS APSNAALSLV IRDKNSGDSG
1801: SVKQTRFTEM VAVQIYRIAF LIMKFLCSQA KEAVKRAGEL EFVDLAHFPE LPMPDILHGL QDQVVSIVTE VLGANGSSAL SGETDRVCRL LLVTLEASLY
1901: MELCVSQSCG IRPVLGRFED FSKGIKAMLH ALEKHSSLKP LVRSLAQITT LLYPGLAQSN FLSM
0101: EAALRASKSL DLDEVQSYIL VKRSSESAPT TRDADPQELL RLVSLQYYLE RQCLLKCIRR IFVHATCTDD DSGSTDAIKQ EASLLGSDEM EQRLLSIIKD
0201: SLAAAFSVKS AADLTVSWLE ESLIEINLIL DILFLAICDN FSRCNGGLWI ALCSLFRDML SGSYDVGKFA VSAEAKRSFH YAKAQLLFIL VETLDLENLL
0301: RMVHDEVSFS GGYSQYSVAD ILEMDIEVSR LPEFEVESGP LLLAWAVFHC LLLSLPGNNA NLEIDHASYA QQAFELAPFN YLLGVLCSSI FRESDGPVSG
0401: FRAVLRSFIS AFIASYEISY QTEDSSLGVI LNIICEVYGG EESLCMQFWD KDSCVDGPIR SVLQMLEKEY PFQITDLLRF LSAVSYGTWP AQCVYNYLER
0501: MNGLTTLYAT PGSVPDSLNY CDQIEIHHPI SIPGMEGITL PRGTRGYILR SLEGNAALVR WEFPHSGVFI LLLTLAQDLY SCNYVEACDI MDLLYQMVSS
0601: NQVLCSALLH ADKSLAVQKS KSLGQIGEYI RIDIVKILCS SVFKYEQDGN NASIMSKTFS VLTEFLKCVP YHVFDVALEC GIFSSQLNDP SSDWLLSGAL
0701: ARMLFAASEE NGDCSSLTTS LLDFAIQVLR KAAAADDMIS PFIVFSVQYI MVNHMNWKHK KYSRWKTTLK VFELVKSCIQ VKPFLSKLGG IIWQMLLYDS
0801: SIHNVLWHNV CTSMQLLESR GSFSNGVEDI EDIQLVLCCG LDIIFFMLSN LPEDLMPVAP FVTLVLSSSL KPLPFITATI SSMSFQNSAL QVSAARALSV
0901: LCFTAHRVQP QLMENGSFLV DGSEIWKLQA SISQILDKED DTNNCLIVAI FSLLTSVARY QPALFVSLTE ENAMIQADHS NSANSQTNGS STLNSSRSNS
1001: RLVEQMLGYI ENSTEFMNSS PSLLLSILDL LEALWESGVQ FICILDKLRS SRTFWESLSC CIRATFDHCP VDSVDTVDEK FSSRYNCQAK IFKIMSHELF
1101: LKGRLLVEAK TSNPVADGTK GQKEPSASYP SNVVCKWFDS ALLEDFINHL SSNGYQKDLF HRAKVASCVC IIRLITKLSS GDTASLSFSA VKKIQLISSK
1201: LLQHRAFIAL LSQYALHGYS GEQELTSLVI NDLYYHIHGE LEGRQITPGP FQELLCFLLE FKFFECNATE QPHSAFPAVS GNVLFDVAHT RDDLGVKFWN
1301: HSDWKPCKEV AEKMLDIMHK ANLMKCHADA KLCTLRSFIT FLSVYTGTSS SNELTLPDGG ISATAMESAI RCACKYLQST VDSLFPEVDT NEVLFPLLSG
1401: QVDLLLTLTR FSFHQAKQTK SYVHLYPVIV LLMRTSGAST SFLVDLVPSS PALRKPVKSL LVLILSLFEF IYGKDAVKDG SGDANLFGES SIISTRLLPV
1501: LCKLAENREY SDLAVGSMDL LLKGFIPPNV WLPILQKHFR LQAILHKCQN GAILSTQVIL NFLLTLGRTK DGAKMLQSAN IFAFLKVLLS KLSLDDSCFR
1601: NSLSSQAKDV HMWSLALAIV ASLNHCMDDD VSRSSVANGT VSFLSGQVPL MSAYLSAQSV NTHQNKKRAV LQQSQTSLSA LSLTENILSL LCVLAKYHFP
1701: RDTGMMQVDS ELREIIIHLL AFISRGSART GDSPNWNPSF FCPPIAKEEV VLHEDPPLIR SKHGWFRLAA SSSLSTAAIS APSNAALSLV IRDKNSGDSG
1801: SVKQTRFTEM VAVQIYRIAF LIMKFLCSQA KEAVKRAGEL EFVDLAHFPE LPMPDILHGL QDQVVSIVTE VLGANGSSAL SGETDRVCRL LLVTLEASLY
1901: MELCVSQSCG IRPVLGRFED FSKGIKAMLH ALEKHSSLKP LVRSLAQITT LLYPGLAQSN FLSM
0001: MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
Arabidopsis Description
Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT4G38760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.