Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 7
- extracellular 6
- endoplasmic reticulum 5
- golgi 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G115830.3 | Barley | extracellular | 79.93 | 76.8 |
| TraesCS7D01G509800.1 | Wheat | plasma membrane | 71.09 | 75.72 |
| Os06t0643500-01 | Rice | extracellular | 55.44 | 63.92 |
| TraesCS7B01G436600.1 | Wheat | extracellular | 44.56 | 63.59 |
| Zm00001d046596_P001 | Maize | extracellular | 57.14 | 55.26 |
| GSMUA_Achr1P26060_001 | Banana | plastid | 41.16 | 54.5 |
| EER88705 | Sorghum | extracellular | 56.46 | 53.72 |
| GSMUA_Achr3P00830_001 | Banana | endoplasmic reticulum, plasma membrane | 34.35 | 51.53 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 26.19 | 46.95 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 33.67 | 30.84 |
| TraesCS2B01G546700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 29.25 | 30.71 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | InterPro:Bifun_inhib/LTP/seed_sf | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005199 |
| InterPro:Hydrophob_seed | PFAM:PF14547 | PRINTS:PR01218 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF1 | InterPro:Pistil_extensin |
| SUPFAM:SSF47699 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G436700 | EnsemblPlants:TraesCS7B01G436700.1 | TIGR:cd01958 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:702648063..702648947
Molecular Weight (calculated)
30001.4 Da
IEP (calculated)
9.559
GRAVY (calculated)
0.028
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASTKKLYP LLLTLLLLLT TAAAVPAIDC DCGNPKAPKP SHPPKTKPPT KGPKPGPKGP TYPSPAPKGH LPHPPVVGPP KGHVPRPPVV GPPKGHVPHP
101: PVVGPPKGHV PRPPVYGPPK GPITRPPVTA PPVVVGPPVT YPTPPVTAPP VTYPAPPVTA PPVTYPAPPV TTPPVTYPAP PVTNPPVTYP SPPVNTPCPP
201: PPPATPAAQT CPVDSLKIGA CVDLLGGLVH VGLGDPVVNK CCPLLEGLVE LEAAVCLCTT IRLKLLNINL VLPLALQLLL TCGKTPPPGY TCSI
101: PVVGPPKGHV PRPPVYGPPK GPITRPPVTA PPVVVGPPVT YPTPPVTAPP VTYPAPPVTA PPVTYPAPPV TTPPVTYPAP PVTNPPVTYP SPPVNTPCPP
201: PPPATPAAQT CPVDSLKIGA CVDLLGGLVH VGLGDPVVNK CCPLLEGLVE LEAAVCLCTT IRLKLLNINL VLPLALQLLL TCGKTPPPGY TCSI
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.