Factsheet for TraesCS7D01G020100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G024100.1	Wheat	plastid	88.29	65.77
TraesCS7D01G020000.1	Wheat	plastid	75.68	59.15
TraesCS2D01G422700.1	Wheat	extracellular	66.67	45.12
TraesCS7A01G024200.1	Wheat	plastid	86.49	43.24
TraesCS2D01G422800.1	Wheat	extracellular, plastid	73.87	42.05
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	55.86	40.0
TraesCS7D01G509900.1	Wheat	endoplasmic reticulum, extracellular	52.25	34.94
VIT_03s0017g02260.t01	Wine grape	extracellular	56.76	32.31
VIT_03s0017g02200.t01	Wine grape	extracellular	54.05	28.71
CDY47794	Canola	extracellular	53.15	26.58
HORVU2Hr1G099370.2	Barley	mitochondrion	63.06	25.93
CDY06505	Canola	extracellular	46.85	25.0
CDY22735	Canola	extracellular	52.25	24.58
Bra038089.1-P	Field mustard	extracellular	54.05	23.44
CDY09061	Canola	extracellular	53.15	23.05
Bra001852.1-P	Field mustard	extracellular	54.05	22.99
CDY59805	Canola	extracellular	48.65	22.88
AT4G15160.1	Thale cress	extracellular	54.95	22.18
Bra023850.1-P	Field mustard	extracellular	45.95	22.17
CDY22936	Canola	plasma membrane	55.86	21.31
Bra037084.1-P	Field mustard	extracellular	49.55	21.07
Bra039563.1-P	Field mustard	plasma membrane	54.95	20.96
CDY39502	Canola	extracellular	50.45	20.74
CDY19310	Canola	extracellular	50.45	20.74
TraesCS7D01G509800.1	Wheat	plasma membrane	47.75	19.2
KRG90032	Soybean	extracellular	54.95	18.6
TraesCS2D01G519700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.95	17.65
PGSC0003DMT400035207	Potato	extracellular	61.26	17.44
AT3G22120.2	Thale cress	plastid	54.95	17.38
Bra031329.1-P	Field mustard	extracellular	52.25	17.06
KRH17654	Soybean	extracellular	55.86	16.15
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	54.95	4.12

Protein Annotations

EnsemblPlants:TraesCS7D01G020100.1	EnsemblPlantsGene:TraesCS7D01G020100	Gene3D:1.10.110.10	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Hydrophob_seed
PANTHER:PTHR31731	PANTHER:PTHR31731:SF16	PFAM:PF14547	SEG:seg	SMART:SM00499	SUPFAM:SSF47699
TIGR:cd01958	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:8699079..8699414

Molecular Weight (calculated)

11431.3 Da

IEP (calculated)

8.211

GRAVY (calculated)

0.386

Length

111 amino acids

Sequence
(BLAST)

001: MPPAPTPMTP TPPPAPAAAP ATSTGKCPVD TLKLRACVDV LNGLLHTVIG SSASNTCCPL LSGVADLDAA LCLCTTIKVK ALNINLMLPI AIEVLVNQCG
101: KRVPKDFRCP N

Best Arabidopsis Sequence Match ( AT3G22120.2 )
(BLAST)

001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A

Arabidopsis Description

CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.