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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • vacuole 3
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plasma membrane, vacuole
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G438900.1 Wheat vacuole 92.75 93.66
TraesCS7A01G053200.1 Wheat vacuole 85.99 86.83
HORVU7Hr1G009700.1 Barley endoplasmic reticulum, plasma membrane, vacuole 38.65 48.78
TraesCS6D01G081400.1 Wheat extracellular 20.29 33.07
Protein Annotations
EnsemblPlants:TraesCS7D01G048500.1EnsemblPlantsGene:TraesCS7D01G048500SEG:segTMHMM:TMhelixMapMan:35.2:
Description
No Description!
Coordinates
chr7D:+:25008617..25009320
Molecular Weight (calculated)
21933.0 Da
IEP (calculated)
4.889
GRAVY (calculated)
0.729
Length
207 amino acids
Sequence
(BLAST)
001: MAMTLEEVLS KQAADLAAIS PAPVRKAVDA LARSSHARAA ADALVYLSVG TTCTMFAAAF LTIFADLACA RGWGCTPAYI LSEIADYLST PVLLLLPPAL
101: VLFFLRAAGC RTKAAADAES LIVKNDEEPT LLSPSPLALA ILWLFIGSAS MGTISFLLFK CGHTEISDLL GYAALLCTFM WEALVYVRAA VALWRMNPGP
201: SNMVAAE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.