Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G036500.1 | Wheat | nucleus | 83.49 | 83.49 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 84.19 | 83.22 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 82.56 | 82.94 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 76.98 | 82.54 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 82.09 | 82.28 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 65.58 | 79.21 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 79.07 | 79.07 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 31.63 | 62.96 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 34.19 | 48.36 |
| Zm00001d006791_P001 | Maize | nucleus | 14.42 | 40.52 |
| KXG21281 | Sorghum | nucleus | 15.81 | 39.31 |
| Zm00001d050594_P001 | Maize | nucleus | 17.67 | 36.02 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 16.51 | 35.86 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 22.79 | 35.77 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 22.09 | 34.67 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 21.63 | 34.07 |
| EES18995 | Sorghum | nucleus | 20.23 | 31.52 |
| Zm00001d024809_P001 | Maize | nucleus | 20.47 | 30.77 |
| EES18996 | Sorghum | nucleus | 20.47 | 30.56 |
| Zm00001d045162_P001 | Maize | nucleus | 19.3 | 28.62 |
| EER89299 | Sorghum | nucleus | 20.23 | 28.43 |
| EER88198 | Sorghum | nucleus | 20.93 | 28.3 |
| Zm00001d010889_P001 | Maize | plastid | 15.81 | 28.22 |
| EER89573 | Sorghum | nucleus | 20.23 | 27.53 |
| Zm00001d024814_P001 | Maize | nucleus | 17.91 | 27.4 |
| OQU76057 | Sorghum | nucleus | 19.53 | 27.36 |
| EER88196 | Sorghum | nucleus | 19.53 | 26.58 |
| EER89387 | Sorghum | nucleus | 19.53 | 26.42 |
| KXG21283 | Sorghum | nucleus | 14.88 | 26.23 |
| OQU77390 | Sorghum | nucleus | 14.42 | 25.41 |
| EER94504 | Sorghum | nucleus | 16.51 | 24.65 |
| KXG21280 | Sorghum | nucleus | 20.0 | 24.16 |
| Os06t0173800-00 | Rice | vacuole | 17.44 | 22.94 |
| EES18997 | Sorghum | nucleus | 20.0 | 22.87 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 18.37 | 20.9 |
| OQU77389 | Sorghum | nucleus | 16.05 | 20.66 |
| Zm00001d024810_P001 | Maize | nucleus | 18.6 | 20.51 |
| KXG21278 | Sorghum | nucleus | 15.35 | 19.19 |
| PGSC0003DMT400086891 | Potato | nucleus | 9.53 | 18.98 |
| Solyc02g082380.1.1 | Tomato | nucleus | 9.07 | 17.57 |
| Solyc02g082390.1.1 | Tomato | nucleus | 10.0 | 15.3 |
| PGSC0003DMT400091980 | Potato | nucleus | 10.0 | 10.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017884 | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51293 | PANTHER:PTHR44042 |
| PANTHER:PTHR44042:SF3 | InterPro:SANT/Myb | InterPro:SANT_dom | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| EnsemblPlantsGene:TraesCS7D01G135000 | EnsemblPlants:TraesCS7D01G135000.1 | TIGR:cd00167 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:86295633..86297714
Molecular Weight (calculated)
48305.8 Da
IEP (calculated)
4.965
GRAVY (calculated)
-0.570
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSIVIQGWT SSQVEEARSL IARLNTNKIM YNANDDKNKK HNYIVNSLHA LFPSKTMQQV IDIYVDLAME MNMIQLREGT HVTGGSPQNM LTFCEPVNGN
101: YELPGEKNGA SNIHGLYTMG DHANGNFGVR EEEATIVDNN GLSFGCVMED TGITVTGEAP LMVDNNKMVV LENNISIDQP VVAPHQWDFW TNKEHSMGDL
201: VNENFEVQED EDTNMDDNGF PFRCALEDTR ITKTEEARMM ADKNKMVLLE NNTSNDRPAV APHQRKLWTI EEHKSFLYGL EIYGRGDWKN ISKHFVTTKT
301: PVQVSSHAQK FFKRIQKKAS SGTKRYSIND VRLHDNELLA ANNSSVPRQA LSFTGLNNDP SFRLQAPTSS LTVMNNQAQC SPSIYNQQVD QQPMWSEQQM
401: MGSVAAVMDG IGNYVPDGQQ GPAYFYLGNV
101: YELPGEKNGA SNIHGLYTMG DHANGNFGVR EEEATIVDNN GLSFGCVMED TGITVTGEAP LMVDNNKMVV LENNISIDQP VVAPHQWDFW TNKEHSMGDL
201: VNENFEVQED EDTNMDDNGF PFRCALEDTR ITKTEEARMM ADKNKMVLLE NNTSNDRPAV APHQRKLWTI EEHKSFLYGL EIYGRGDWKN ISKHFVTTKT
301: PVQVSSHAQK FFKRIQKKAS SGTKRYSIND VRLHDNELLA ANNSSVPRQA LSFTGLNNDP SFRLQAPTSS LTVMNNQAQC SPSIYNQQVD QQPMWSEQQM
401: MGSVAAVMDG IGNYVPDGQQ GPAYFYLGNV
001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.